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.gitignore
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.gitignore
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# my files
#bash_scripts/master_samsa2.slurm
#bash_scripts/cyanotoxin_master_samsa2.slurm
#R_scripts/combining_umerged.R
# Swap files
*.swp
*.swo
# Temporary files
.RData
.Rhistory
output_test
# Input directories
input_files
# Output directories
logs
step_1_output
step_2_output
step_3_output
step_4_output
step_5_output
step_1_output_test
step_2_output_test
step_3_output_test
step_4_output_test
step_5_output_test
# Extracted programs
R_scripts/packages
programs/pear-0.9.10-linux-x86_64
programs/Trimmomatic-0.36
programs/diamond
programs/diamond-sse2
programs/diamond_manual.pdf
programs/sortmerna-2.1