5 May 2020

or, too much on my mind

VisiData lab meeting
Nextstrain CLI
- Clarify nextstrain check-setup output
- Recommend nextstrain check-setup --set-default in docs
- Upload/download progress meter using tqdm for nextstrain build --aws-batch
- Support Nextstrain Groups (Charon v2 API) destination in nextstrain remote commands
- nextstrain login
- nextstrain config
SCAN process improvements
- Internal record switchboard for receiving team
- Kit personalization plan for shipping team
nextstrain/ncov
- Produce commented excludes file in ncov-ingest
- Automatically combined with excludes in build
ID3C
- CI tests for Sqitch changes
VisiData test harness
VisiData AWS Batch plugin
Structured log handler for Snakemake