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2021-10-06.md

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6 October 2021

or, …

👀

  • Zoho Desk setup (support.nextstrain.org)

    • Review/modify notification rules
    • Review/modify notification content (particularly to requestors)
    • Review/modify ticket workflow ("blueprint")
    • Help Desk visibility to external folks?

  • GCP organization, for use with Terra

  • Env var support in Nextstrain CLI

    • --env FOO (implemented in terms of an env dir)
    • --envdir my-env.d

  • nextstrain view support for narratives

  • API surface thinking/discussion; see below

  • Buildpacks, etc.

  • Good update story for software + pipeline + data, etc. with nextstrain update. Build on buildpacks (images of pipelines).

  • nextstrain setup

  • Unified TOC

nextstrain.org

Media type JSON schema
application/vnd.nextstrain.v2.main+json augur/data/schema-export-v2.json
application/vnd.nextstrain.v1.meta+json augur/data/schema-export-v1-meta.json
application/vnd.nextstrain.v1.tree+json augur/data/schema-export-v1-tree.json
application/vnd.nextstrain.vX.root-sequence+json
application/vnd.nextstrain.vY.tip-frequencies+json 
/groups/blab/ncov/early-outbreak/root-A                   Accept: application/json
/groups/blab/ncov/early-outbreak/root-A?root-sequence     Accept: application/json
/groups/blab/ncov/early-outbreak/root-A?tip-frequencies   Accept: application/json

/groups/blab/ncov/early-outbreak/root-A                   Accept: application/vnd.nextstrain.v2.main+json
/groups/blab/ncov/early-outbreak/root-A                   Accept: application/vnd.nextstrain.vX.root-sequence+json
/groups/blab/ncov/early-outbreak/root-A                   Accept: application/vnd.nextstrain.vY.tip-frequencies+json

/groups/blab/ncov/early-outbreak/root-A.json
/groups/blab/ncov/early-outbreak/root-A_root-sequence.json
/groups/blab/ncov/early-outbreak/root-A_tip-frequencies.json


groups/
  blab/
    ncov/
      early-outbreak/
        root-A/
          index.html
        root-A.json
        root-A_root-sequence.json
        root-A_tip-frequencies.json


Link: </groups/blab/ncov/early-outbreak/root-A>; rel=alternate; type=application/json,
      </groups/blab/ncov/early-outbreak/root-A?root-sequence>; rel=alternate; type=application/json,
      </groups/blab/ncov/early-outbreak/root-A?tip-frequencies>; rel=alternate; type=application/json

Link: </groups/blab/ncov/early-outbreak/root-A.json>; rel=alternate; type=application/json,
      </groups/blab/ncov/early-outbreak/root-A_root-sequence.json>; rel=alternate; type=application/json,
      </groups/blab/ncov/early-outbreak/root-A_tip-frequencies.json>; rel=alternate; type=application/json

Link: </groups/blab/ncov/early-outbreak/root-A>; rel=alternate; type=application/vnd.nextstrain.v2.main+json,
      </groups/blab/ncov/early-outbreak/root-A>; rel=alternate; type=application/vnd.nextstrain.v2.root-sequence+json,
      </groups/blab/ncov/early-outbreak/root-A>; rel=alternate; type=application/vnd.nextstrain.v2.tip-frequencies+json