-
Notifications
You must be signed in to change notification settings - Fork 0
/
metadata.yaml
21 lines (21 loc) · 704 Bytes
/
metadata.yaml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
---
Category: tool
Description: Kataegis is a localized hypermutation occurring when a region is enriched in somatic SNVs. Kataegis can result from multiple cytosine deaminations catalyzed by the AID/APOBEC family of proteins. This package contains functions to detect kataegis from SNVs in BED format. This package reports two scores per kataegic event, a hypermutation score and an APOBEC mediated kataegic score.
Maintainers: Paul Boutros
Contributors:
- Fouad Yousif
- Xihui Lin
- Fan Fan
- Christopher Lalansingh
- John Macdonald
Languages:
- R
- C
- C++
Dependencies:
- R (>= 2.15.1)
- foreach
- doParallel
- Rcpp
References: "https://doi.org/10.1101/287839"
Version: 0.0.8