SI_quantify_250eV_offset_C_In_O.ipynb

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      "WARNING:hyperspy.api:The traitsui GUI elements are not available, probably because the hyperspy_gui_traitui package is not installed.\n"
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    "import hyperspy.api as hp\n",
    "import scipy.io as sio\n",
    "%matplotlib qt5"
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      "WARNING:hyperspy.signal:<EELSSpectrum, title: EELS Spectrum Image disp0.5offset250time0.5s, dimensions: (44, 90|1024)> data is replaced by its optimized copy\n"
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   "source": [
    "s = hp.load('/Users/veersaysit/Desktop/EELS data/Ge-basedSolarCell_24082015/EELS Spectrum Image disp0.5offset250time0.5s.dm3')"
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   "source": [
    "s_C = s.remove_background(signal_range=(242.,283.)).isig[284.:334.].integrate1D(axis=\"Energy loss\")\n",
    "s_In = s.remove_background(signal_range=(363.,442.)).isig[443.:532.].integrate1D(axis=\"Energy loss\")\n",
    "s_O = s.remove_background(signal_range=(487.,531.)).isig[532.:582.].integrate1D(axis=\"Energy loss\")"
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   "execution_count": 4,
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   "source": [
    "sio.savemat(\"C_hspy\",{\"C_hspy\":s_C.data})\n",
    "sio.savemat(\"In_hspy\",{\"In_hspy\":s_In.data})\n",
    "sio.savemat(\"O_hspy\",{\"O_hspy\":s_O.data})"
   ]
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