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Draft Changelog
Adam Novak edited this page Jul 30, 2024
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449 revisions
This page tracks all changes since the last release of VG.
When you merge a PR, add a bullet point to this page.
When you do a release, copy the changelog from this page and clear it out.
- Experimental haploid scoring model for haplotype sampling.
- Faster BAM output when using a GBZ format graph
-
vg inject
no longer reports invalid alignments -
vg giraffe --parameter-preset
long-form option should now work again -
vg surject
now complains if extra command line arguemnts are provided - vg Mac builds no longer pass
-headerpad
without an argument to the linker -
vg giraffe
in non-chaining single-end mode will again prioritize minimizers the same way as in paired-end mode - README no longer interpretable as suggesting that users build with very old Clang
-
vg surject
now uses an unlimited--max-anchors
by default -
vg clip
faster on graphs with high path depth -
vg surject
has improved base-level alignment accuracy with long reads - Random walk band padding is now available outside
MultipathAligner
- Gapless extension queue order should no longer cause
vg giraffe
output to very across compilers -
vg giraffe --show-work
no longer claims to not be doing rescue when it is