DESCRIPTION

Package: DALI
Type: Package
Title: Diversity AnaLysis Interface
Version: 2.1.2
Authors@R: c(
    person(
        "Kevin",
        "Verstaen",
        email = "kevin.verstaen@irc.vib-ugent.be",
        role = c("cre", "aut")
    ),
    person(
        "Stijn",
        "Vanhee",
        email = "stijn.vanhee@irc.vib-ugent.be",
        role = c("aut")
    ),
    person(
        "Jana",
        "Roels",
        email = "jana.roels@irc.vib-ugent.be",
        role = c("ctb")
    ),
    person(
        "Niels",
        "Vandamme",
        email = "niels.vandamme@vib.be",
        role = c("ctb")
    )
  )
Description: Analyse VDJ data in the Seurat ecosystem.
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
biocViews:
Remotes:
    dynverse/dynplot,
    dynverse/dynwrap,
    YuLab-SMU/ggtree
Requires:
    R (>= 3.5.0)
Imports:
    ape,
    circlize,
    dplyr,
    DT,
    ggplot2,
    ggraph,
    ggrepel,
    ggridges,
    ggtree,
    gridExtra,
    gtools,
    igraph,
    Matrix,
    methods,
    pheatmap,
    Polychrome,
    reldist,
    reshape2,
    rlang,
    sass,
    scales,
    Seurat (>= 4.0.0),
    shiny,
    shinycssloaders,
    shinyFiles,
    slingshot,
    stringdist,
    stringr,
    tibble,
    tidygraph,
    tidyr,
    treeio,
    vegan
Suggests:
    dynplot,
    dynwrap,
    testthat (>= 3.0.0)
Config/testthat/edition: 3