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Is HTO assay necessary for this app to be used? #11
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Dali team, OK thanks so much for your answers. I was just asking if it can be optional to have RNA data as I don't have that generated for some projects. I see your point. Thanks again, |
FYI: we got this request from other people aswell and will be looking how we can integrate this. |
Sounds great. Thanks. |
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Dear DALI team,
Few questions.
Can you please provide a link or code on how you built the seuratObj.rds object? It will help us use the app if we can reproduce your your .rds object as well and use the same for my 10x rna data too.
Does the DALI app really require an HTO based rnaseq data? What if we do not have this assay and it's a simple citeseq or rnaseq?
Do you have a version of this app where integration of vdj data is not necessary with the rna or hto data assays? Do you have a version of just vdj data that you have also created and can share?
Thanks so much,
Jessie.
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