TensorStore

[lexming]

• link to support ticket: INC0149937 (VUB)
• website: https://github.com/google/tensorstore
• installation docs: https://google.github.io/tensorstore/installation.html
• toolchain: foss/2023a
• easyblock to use: PythonBundle
• required dependencies:
  • https://github.com/google/tensorstore/blob/master/third_party/third_party.bzl
• notes:
  • Build system uses Bazel. So it bundles a gazillion dependencies. Fortunately, it seems that developers provide a way to use external libs: https://google.github.io/tensorstore/installation.html#bazel-build-requirements
• effort: quite
• other install methods
  • conda: no
  • container image: no
  • pre-built binaries (RHEL8 Linux x86_64): no
  • easyconfig outside EasyBuild: no

[lexming]

Tensorstore is installed as part of is installed as part of Flax.

PRs:

• reorganize Flax/JAX stack in 2023a: move jax + Optax to gfbf/2023a toolchain + use standalone Flax + absl-py as dependencies easybuilders/easybuild-easyconfigs#21038
• use stand-alone absl-py as dependency for jax w/ gfbf/2023a + CUDA 12.1.1 + add Optax v0.2.2, Flax v0.8.4, scvi-tools v1.1.2 easybuilders/easybuild-easyconfigs#21039