OpenFlexTyper_CondaEnv.yml

# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
name: openFlexTyper 
channels:
        - conda-forge 
        - bioconda
dependencies:
        - _libgcc_mutex=0.1
        - binutils_impl_linux-64=2.33.1
        - binutils_linux-64=2.33.1
        - ca-certificates=2019.9.11
        - dbus=1.13.12
        - expat=2.2.6
        - fontconfig=2.13.0
        - freetype=2.9.1
        - gcc_impl_linux-64=7.3.0
        - gcc_linux-64=7.3.0
        - git=2.23.0
        - glib=2.63.1
        - gst-plugins-base=1.14.0
        - gstreamer=1.14.0
        - gxx_impl_linux-64=7.3.0
        - gxx_linux-64=7.3.0
        - icu=58.2
        - jpeg=9b
        - krb5=1.16.1
        - ld_impl_linux-64=2.33.1
        - libcurl=7.67.0
        - libedit=3.1.20181209
        - libffi=3.2.1
        - libgcc-ng=9.1.0
        - libpng=1.6.37
        - libssh2=1.8.2
        - libstdcxx-ng=9.1.0
        - libuuid=1.0.3
        - libxcb=1.13
        - libxml2=2.9.9
        - ncurses=6.1
        - openssl=1.1.1d
        - pcre=8.43
        - perl=5.26.2
        - qt=5.9.7
        - sdsl-lite=2.1.1
        - sqlite=3.30.1
        - tk=8.6.8
        - xz=5.2.4
        - zlib=1.2.11
        - git-lfs=2.9.1
        - biopython=1.74
        - pysam=0.15.3
        - pybedtools=0.8.0
        - cyvcf2=0.11.5