PretextView 1.0.1 (Three platforms supported)

• Windows-x86_64, Linux-x86_64, Mac-x86_64, and Mac-arm64 are supported.
• Fixed path error for shader source files.
• Fixed crash down problem for Windows while using YAHS sort. This error is caused by the uninlitilised pointers within the object in the fragment sort source code.
• Fixed torch lib error for Linux, currently the AI model is excluded from this release. In the future we are going to introduce the AI module inside, which will include the torch library again.
• Add deploy.yml which will automatically run and upload the install packages to the release page. This deploy action will start when new tag is created.

NOTE for Mac user who downloads this from Release page. If the user is told that the software is damaged, please eject the mounted dmg file and run

xattr -d com.apple.quarantine /path/to/the/downloaded/dmg/file

to remove the quarantine and re-mount the dmg file. And then try to open the PretextViewAI.app.

PretextView 1.0.0

What's Changed

Features added:

• Automatic curation: YaHS algorithm sorting of contigs, globally or locally within selected area

• UserProfile function: background color, color map, meta tag style, extension graph style

• Input sequence search and adaptive zoom locating

• Jump to diagonal after fragment selection whilst in edit mode

• Change to waypoints - vertical, horizontal, cross

• Embedded extension track toggle menu (x)

• Top level extension track toggle for "coverage" and "gap"

• Updated Metadata tags list

• Metadata tags sorting function

• Map cache clear function

• Compile script is changed from meson to CMake

• Icon updates to new version v1.0.0

New Contributors

• @guanshaoheng
• @atharvfakatkar

Full Changelog: 0.2.5...1.0.0

PretextView 0.2.5

0.2.5 full release

Full Changelog: 0.2.4...0.2.5

PretextView 0.2.5 devel release 2

0.2.5 development release version 2. Shouldn't be considered production ready.

New features:

• Option to preserve sequence order in AGP output.
• Option to display embedded graph labels.

Note: Save-states only compatible with previous version (0.2.5-dev-1).

Full Changelog: 0.2.4...0.2.5-dev-2

PretextView 0.2.5 devel release 1

0.2.5 development release version 1. Shouldn't be considered production ready.

New features:

• More default tags
• Painted sequences auto-tagged in AGP output
• Higher resolution support (experimental)

Note: Save-states not compatible with previous version.

PretextView 0.2.5 devel release 0

0.2.5 development release version 0. Shouldn't be considered production ready.

New features:

• More scaffold painting options.
• Meta data tags to map sequences.
• Scaffold lookup menu.

Improvements:

• More accurate position info on tooltip.

Note: Save-states not compatible with previous version.

PretextView 0.2.4

Bug fix (from 0.2.3) -> Program would crash displaying any embedded graphs at the end of a map.

PretextView 0.2.3

Bug fix -> Scaffold painting small sequences at edges of map.

New feature -> In AGP output, added the option 'Format Singletons', which preserves singleton orientations in AGP output. This is non-standard AGP format, so should be used with caution.

PretextView 0.2.2

Bug fix, program would sometimes get stuck in an infinite loop loading waypoint data from save-states

PretextView 0.2.1

Bug fix. Fixes memory overflow bug when opening maps with very high number of sequences.