These notebooks were developed and used by Oleksandr Petrenko to analyze transcriptomics datasets for the study:
Petrenko, O., Königshofer, P., Brusilovskaya, K., Hofer, B.S., Bareiner, K., Simbrunner, B., Jühling, F., Baumert, T.F., Lupberger, J., Trauner, M., et al. (2024). Transcriptomic signatures of progressive and regressive liver fibrosis and portal hypertension. iScience 27. 10.1016/j.isci.2024.109301.
For study-related questions, please contact the corresponding author, Prof. Thomas Reiberger (thomas.reiberger@meduniwien.ac.at). For bioinformatics-related questions, contact Dr. Oleksandr Petrenko (oleksandr.petrenko@meduniwien.ac.at or @xander-p).
- Zenodo archived version: 10.5281/zenodo.10230613
- ArrayExpress (pre-processed data): E-MTAB-13804
- ENA (raw data): PRJEB63606