functionSignatures.json

{
"nii_tool":
{
    "inputs":
        [
            {"name":"cmd", "kind":"required", "type":"choices={'hdr'}"},
            {"name":"filename", "kind":"required", "type":"filepath=*.hdr,*.nii,*.nii.gz"}
        ]
},
"nii_tool":
{
    "inputs":
        [
            {"name":"cmd", "kind":"required", "type":"choices={'load', 'img', 'ext'}"},
            {"name":"filename", "kind":"required", "type":[["struct"], ["filepath=*.hdr,*.nii,*.nii.gz"]]}
        ]
},
"nii_tool":
{
    "inputs":
        [
            {"name":"cmd", "kind":"required", "type":"choices={'init'}"},
            {"name":"img", "kind":"required", "type":"numeric"}
        ]
},
"nii_tool":
{
    "inputs":
        [
            {"name":"cmd", "kind":"required", "type":"choices={'save', 'update'}"},
            {"name":"nii", "kind":"required", "type":"struct"}
        ]
},
"nii_tool":
{
    "inputs":
        [
            {"name":"cmd", "kind":"required", "type":"choices={'cat3D'}"},
            {"name":"filename", "kind":"required", "type":"filepath=*.hdr,*.nii,*.nii.gz"}
        ]
},
"nii_moco":
{
    "inputs":
        [
            {"name":"nii", "kind":"required", "type":[["struct"], ["filepath=*.hdr,*.nii,*.nii.gz"]]},
            {"name":"out", "kind":"positional", "type":"char"},
            {"name":"ref", "kind":"positional", "type":[["struct"], ["numeric"], ["filepath=*.nii,*.nii.gz"]]}
        ]
},
"dicm2nii":
{
    "inputs":
        [
            {"name":"src", "kind":"positional", "type":[["folderpath"], ["filepath=*.dcm,*.par,*.xml"]]},
            {"name":"niiFolder", "kind":"positional", "type":[["char"], ["folderpath"]]},
            {"name":"fmt", "kind":"positional", "type":"choices={'.hdr', '.hdr.gz', '.hdr (3D)', '.nii', '.nii (3D)', '.nii.gz'}"}
        ]
},
"nii_stc":
{
    "inputs":
        [
            {"name":"nii", "kind":"required", "type":[["struct"], ["filepath=*.nii,*.nii.gz"]]},
            {"name":"out", "kind":"positional", "type":"char"},
            {"name":"timing", "kind":"positional", "type":"numeric"}
        ]
},
"anonymize_dicm":
{
    "inputs":
        [
            {"name":"src", "kind":"positional", "type":"filepath=*.par,*.dcm"},
            {"name":"rst", "kind":"positional", "type":[["folderpath"], ["filepath=*.par,*.dcm"]]},
            {"name":"subID", "kind":"positional", "type":[["char"], ["numeric"]]}
        ]
},
"nii_viewer":
{
    "inputs":
        [
            {"name":"fname", "kind":"positional", "type":[["struct"], ["filepath=*.hdr,*.nii,*.nii.gz"]]},
            {"name":"overlayName", "kind":"positional", "type":[["struct"], ["cell"], ["filepath=*.hdr,*.nii,*.nii.gz"]]}
        ]
},
"nii_xform":
{
    "inputs":
        [
            {"name":"src", "kind":"required", "type":[["struct"], ["numeric"], ["filepath=*.hdr,*.nii,*.nii.gz"]]},
            {"name":"target", "kind":"required", "type":[["struct"], ["numeric"], ["filepath=*.hdr,*.nii,*.nii.gz"]]},
            {"name":"rst", "kind":"positional", "type":"char"},
            {"name":"intrp", "kind":"positional", "type":"choices={'linear', 'nearest', 'cubic', 'spline'}"},
            {"name":"missVal", "kind":"positional", "type":"numeric"}
        ]
},
"dicm_hdr":
{
    "inputs":
        [
            {"name":"fname", "kind":"required", "type":"filepath=*.par,*.dcm,*.xml"},
            {"name":"dict", "kind":"positional", "type":"struct"},
            {"name":"iFrames", "kind":"positional", "type":"numeric"}
        ]
},
"dicm_img":
{
    "inputs":
        [
            {"name":"s", "kind":"required", "type":[["struct"], ["filepath=*.par,*.dcm"]]},
            {"name":"xpose", "kind":"optional", "type":[["logical"], ["numeric"]]}
        ]
},
"dicm_dict":
{
    "inputs":
        [
            {"name":"vendor", "kind":"positional", "type":"choices={'SIEMENS', 'GE', 'Philips'}"},
            {"name":"flds",   "kind":"positional", "type":[["char"], ["cell"]]}
        ]
},
"nii_coreg":
{
    "inputs":
        [
            {"name":"niiT", "kind":"required", "type":[["struct"], ["filepath=*.nii,*.nii.gz"]]},
            {"name":"niiM", "kind":"required", "type":[["struct"], ["filepath=*.nii,*.nii.gz"]]}
        ]
},
"nii_deface":
{
    "inputs":
        [
            {"name":"in", "kind":"required", "type":[["struct"], [["folderpath"], "filepath=*.nii,*.nii.gz"]]}
        ]
}
}