Compile deformable convolutional: gcc distutils.errors.LinkError #77
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sunpeng981712364
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sunpeng981712364
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when I compile DCNv2, input ./make.sh , the error occured. could you please help me @xingyizhou @huangqx . Many thanks.
./make.sh: line 5: nvcc: command not found
./make.sh: line 6: nvcc: command not found
./make.sh: line 9: nvcc: command not found
./make.sh: line 10: nvcc: command not found
/home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2
Including CUDA code.
/home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2
generating /tmp/tmp84udokg_/dcn_v2.c
setting the current directory to '/tmp/tmp84udokg'
running build_ext
building '_dcn_v2' extension
creating home
creating home/pengsun
creating home/pengsun/codes
creating home/pengsun/codes/CenterNet
creating home/pengsun/codes/CenterNet/src
creating home/pengsun/codes/CenterNet/src/lib
creating home/pengsun/codes/CenterNet/src/lib/models
creating home/pengsun/codes/CenterNet/src/lib/models/networks
creating home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2
creating home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src
gcc -pthread -B /home/pengsun/anaconda3/envs/CenterNet/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_CUDA -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/TH -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/THC -I/usr/local/cuda/include -I/home/pengsun/anaconda3/envs/CenterNet/include/python3.6m -c _dcn_v2.c -o ./_dcn_v2.o -std=c99 -fopenmp -std=c99
gcc -pthread -B /home/pengsun/anaconda3/envs/CenterNet/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_CUDA -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/TH -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/THC -I/usr/local/cuda/include -I/home/pengsun/anaconda3/envs/CenterNet/include/python3.6m -c /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2.c -o ./home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2.o -std=c99 -fopenmp -std=c99
gcc -pthread -B /home/pengsun/anaconda3/envs/CenterNet/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_CUDA -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/TH -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/THC -I/usr/local/cuda/include -I/home/pengsun/anaconda3/envs/CenterNet/include/python3.6m -c /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2_cuda.c -o ./home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2_cuda.o -std=c99 -fopenmp -std=c99
gcc -pthread -shared -B /home/pengsun/anaconda3/envs/CenterNet/compiler_compat -L/home/pengsun/anaconda3/envs/CenterNet/lib -Wl,-rpath=/home/pengsun/anaconda3/envs/CenterNet/lib -Wl,--no-as-needed -Wl,--sysroot=/ ./_dcn_v2.o ./home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2.o ./home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2_cuda.o /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/cuda/dcn_v2_im2col_cuda.cu.o /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/cuda/dcn_v2_psroi_pooling_cuda.cu.o -o ./_dcn_v2.so
gcc: error: /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/cuda/dcn_v2_im2col_cuda.cu.o: No such file or directory
gcc: error: /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/cuda/dcn_v2_psroi_pooling_cuda.cu.o: No such file or directory
Traceback (most recent call last):
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/unixccompiler.py", line 197, in link
self.spawn(linker + ld_args)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/ccompiler.py", line 909, in spawn
spawn(cmd, dry_run=self.dry_run)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/spawn.py", line 36, in spawn
_spawn_posix(cmd, search_path, dry_run=dry_run)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/spawn.py", line 159, in _spawn_posix
% (cmd, exit_status))
distutils.errors.DistutilsExecError: command 'gcc' failed with exit status 1
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/ffiplatform.py", line 51, in _build
dist.run_command('build_ext')
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/command/build_ext.py", line 339, in run
self.build_extensions()
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/command/build_ext.py", line 448, in build_extensions
self._build_extensions_serial()
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/command/build_ext.py", line 473, in _build_extensions_serial
self.build_extension(ext)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/command/build_ext.py", line 558, in build_extension
target_lang=language)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/ccompiler.py", line 717, in link_shared_object
extra_preargs, extra_postargs, build_temp, target_lang)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/unixccompiler.py", line 199, in link
raise LinkError(msg)
distutils.errors.LinkError: command 'gcc' failed with exit status 1
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "build.py", line 43, in
ffi.build()
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/init.py", line 189, in build
_build_extension(ffi, cffi_wrapper_name, target_dir, verbose)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/init.py", line 111, in _build_extension
outfile = ffi.compile(tmpdir=tmpdir, verbose=verbose, target=libname)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/api.py", line 723, in compile
compiler_verbose=verbose, debug=debug, **kwds)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/recompiler.py", line 1526, in recompile
compiler_verbose, debug)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/ffiplatform.py", line 22, in compile
outputfilename = _build(tmpdir, ext, compiler_verbose, debug)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/ffiplatform.py", line 58, in _build
raise VerificationError('%s: %s' % (e.class.name, e))
cffi.VerificationError: LinkError: command 'gcc' failed with exit status 1
Including CUDA code.
/home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2
generating /tmp/tmppbp306qe/_dcn_v2_double.c
setting the current directory to '/tmp/tmppbp306qe'
running build_ext
building '_dcn_v2_double' extension
creating home
creating home/pengsun
creating home/pengsun/codes
creating home/pengsun/codes/CenterNet
creating home/pengsun/codes/CenterNet/src
creating home/pengsun/codes/CenterNet/src/lib
creating home/pengsun/codes/CenterNet/src/lib/models
creating home/pengsun/codes/CenterNet/src/lib/models/networks
creating home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2
creating home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src
gcc -pthread -B /home/pengsun/anaconda3/envs/CenterNet/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_CUDA -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/TH -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/THC -I/usr/local/cuda/include -I/home/pengsun/anaconda3/envs/CenterNet/include/python3.6m -c _dcn_v2_double.c -o ./_dcn_v2_double.o -std=c99 -fopenmp -std=c99
gcc -pthread -B /home/pengsun/anaconda3/envs/CenterNet/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_CUDA -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/TH -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/THC -I/usr/local/cuda/include -I/home/pengsun/anaconda3/envs/CenterNet/include/python3.6m -c /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2_double.c -o ./home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2_double.o -std=c99 -fopenmp -std=c99
gcc -pthread -B /home/pengsun/anaconda3/envs/CenterNet/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -DWITH_CUDA -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/TH -I/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/../../lib/include/THC -I/usr/local/cuda/include -I/home/pengsun/anaconda3/envs/CenterNet/include/python3.6m -c /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2_cuda_double.c -o ./home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2_cuda_double.o -std=c99 -fopenmp -std=c99
gcc -pthread -shared -B /home/pengsun/anaconda3/envs/CenterNet/compiler_compat -L/home/pengsun/anaconda3/envs/CenterNet/lib -Wl,-rpath=/home/pengsun/anaconda3/envs/CenterNet/lib -Wl,--no-as-needed -Wl,--sysroot=/ ./_dcn_v2_double.o ./home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2_double.o ./home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/dcn_v2_cuda_double.o /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/cuda/dcn_v2_im2col_cuda_double.cu.o /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/cuda/dcn_v2_psroi_pooling_cuda_double.cu.o -o ./_dcn_v2_double.so
gcc: error: /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/cuda/dcn_v2_im2col_cuda_double.cu.o: No such file or directory
gcc: error: /home/pengsun/codes/CenterNet/src/lib/models/networks/DCNv2/src/cuda/dcn_v2_psroi_pooling_cuda_double.cu.o: No such file or directory
Traceback (most recent call last):
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/unixccompiler.py", line 197, in link
self.spawn(linker + ld_args)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/ccompiler.py", line 909, in spawn
spawn(cmd, dry_run=self.dry_run)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/spawn.py", line 36, in spawn
_spawn_posix(cmd, search_path, dry_run=dry_run)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/spawn.py", line 159, in _spawn_posix
% (cmd, exit_status))
distutils.errors.DistutilsExecError: command 'gcc' failed with exit status 1
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/ffiplatform.py", line 51, in _build
dist.run_command('build_ext')
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/command/build_ext.py", line 339, in run
self.build_extensions()
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/command/build_ext.py", line 448, in build_extensions
self._build_extensions_serial()
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/command/build_ext.py", line 473, in _build_extensions_serial
self.build_extension(ext)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/command/build_ext.py", line 558, in build_extension
target_lang=language)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/ccompiler.py", line 717, in link_shared_object
extra_preargs, extra_postargs, build_temp, target_lang)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/distutils/unixccompiler.py", line 199, in link
raise LinkError(msg)
distutils.errors.LinkError: command 'gcc' failed with exit status 1
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "build_double.py", line 43, in
ffi.build()
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/init.py", line 189, in build
_build_extension(ffi, cffi_wrapper_name, target_dir, verbose)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/torch/utils/ffi/init.py", line 111, in _build_extension
outfile = ffi.compile(tmpdir=tmpdir, verbose=verbose, target=libname)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/api.py", line 723, in compile
compiler_verbose=verbose, debug=debug, **kwds)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/recompiler.py", line 1526, in recompile
compiler_verbose, debug)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/ffiplatform.py", line 22, in compile
outputfilename = _build(tmpdir, ext, compiler_verbose, debug)
File "/home/pengsun/anaconda3/envs/CenterNet/lib/python3.6/site-packages/cffi/ffiplatform.py", line 58, in _build
raise VerificationError('%s: %s' % (e.class.name, e))
cffi.VerificationError: LinkError: command 'gcc' failed with exit status 1
/CenterNet/src/lib/models/networks/DCNv2/src/cuda/ have the following file. It seem to cause by gcc.
dcn_v2_im2col_cuda.cu dcn_v2_im2col_cuda_double.h dcn_v2_psroi_pooling_cuda.cu dcn_v2_psroi_pooling_cuda_double.h
dcn_v2_im2col_cuda_double.cu dcn_v2_im2col_cuda.h dcn_v2_psroi_pooling_cuda_double.cu dcn_v2_psroi_pooling_cuda.h
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