-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathmanifest.json
645 lines (645 loc) · 34.8 KB
/
manifest.json
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
{
"version" : 1,
"locale" : "en_US",
"platform" : "3.3.2",
"metadata" : {
"appmode" : "shiny",
"primary_rmd" : null,
"primary_html" : null,
"content_category" : null,
"has_parameters" : false
},
"packages" : {
"R6" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "R6",
"Title" : "Classes with Reference Semantics",
"Version" : "2.2.0",
"Authors@R" : "person(\"Winston\", \"Chang\", role = c(\"aut\", \"cre\"), email = \"winston@stdout.org\")",
"Description" : "The R6 package allows the creation of classes with reference\n semantics, similar to R's built-in reference classes. Compared to reference\n classes, R6 classes are simpler and lighter-weight, and they are not built\n on S4 classes so they do not require the methods package. These classes\n allow public and private members, and they support inheritance, even when\n the classes are defined in different packages.",
"Depends" : "R (>= 3.0)",
"Suggests" : "knitr, microbenchmark, pryr, testthat, ggplot2, scales",
"License" : "MIT + file LICENSE",
"URL" : "https://github.com/wch/R6/",
"LazyData" : "true",
"VignetteBuilder" : "knitr",
"RoxygenNote" : "5.0.1",
"NeedsCompilation" : "no",
"Packaged" : "2016-10-03 20:49:50 UTC; winston",
"Author" : "Winston Chang [aut, cre]",
"Maintainer" : "Winston Chang <winston@stdout.org>",
"Repository" : "CRAN",
"Date/Publication" : "2016-10-05 09:29:43",
"Built" : "R 3.3.0; ; 2016-10-06 13:39:01 UTC; unix"
}
},
"RColorBrewer" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "RColorBrewer",
"Version" : "1.1-2",
"Date" : "2014-12-07",
"Title" : "ColorBrewer Palettes",
"Authors@R" : "c(person(given = \"Erich\", family = \"Neuwirth\", role = c(\"aut\",\n \"cre\"), email = \"erich.neuwirth@univie.ac.at\"))",
"Author" : "Erich Neuwirth [aut, cre]",
"Maintainer" : "Erich Neuwirth <erich.neuwirth@univie.ac.at>",
"Depends" : "R (>= 2.0.0)",
"Description" : "Provides color schemes for maps (and other graphics)\n designed by Cynthia Brewer as described at http://colorbrewer2.org",
"License" : "Apache License 2.0",
"Packaged" : "2014-12-06 23:59:42 UTC; neuwirth",
"NeedsCompilation" : "no",
"Repository" : "CRAN",
"Date/Publication" : "2014-12-07 08:28:55",
"Built" : "R 3.3.0; ; 2016-05-04 14:03:36 UTC; unix"
}
},
"Rcpp" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "Rcpp",
"Title" : "Seamless R and C++ Integration",
"Version" : "0.12.10",
"Date" : "2017-03-17",
"Author" : "Dirk Eddelbuettel, Romain Francois, JJ Allaire, Kevin Ushey, Qiang Kou,\n Nathan Russell, Douglas Bates and John Chambers",
"Maintainer" : "Dirk Eddelbuettel <edd@debian.org>",
"Description" : "The 'Rcpp' package provides R functions as well as C++ classes which\n offer a seamless integration of R and C++. Many R data types and objects can be\n mapped back and forth to C++ equivalents which facilitates both writing of new\n code as well as easier integration of third-party libraries. Documentation \n about 'Rcpp' is provided by several vignettes included in this package, via the \n 'Rcpp Gallery' site at <http://gallery.rcpp.org>, the paper by Eddelbuettel and \n Francois (2011, JSS), and the book by Eddelbuettel (2013, Springer); see \n 'citation(\"Rcpp\")' for details on these last two.",
"Depends" : "R (>= 3.0.0)",
"Imports" : "methods, utils",
"Suggests" : "RUnit, inline, rbenchmark, highlight, pkgKitten (>= 0.1.2)",
"VignetteBuilder" : "highlight",
"URL" : "http://www.rcpp.org, http://dirk.eddelbuettel.com/code/rcpp.html,\nhttps://github.com/RcppCore/Rcpp",
"License" : "GPL (>= 2)",
"BugReports" : "https://github.com/RcppCore/Rcpp/issues",
"MailingList" : "Please send questions and comments regarding Rcpp to\nrcpp-devel@lists.r-forge.r-project.org",
"RoxygenNote" : "5.0.1",
"NeedsCompilation" : "yes",
"Packaged" : "2017-03-17 12:32:02.116916 UTC; edd",
"Repository" : "CRAN",
"Date/Publication" : "2017-03-19 12:33:00 UTC",
"Built" : "R 3.3.2; x86_64-apple-darwin13.4.0; 2017-03-20 11:30:29 UTC; unix"
}
},
"colorspace" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "colorspace",
"Version" : "1.3-2",
"Date" : "2016-12-14",
"Title" : "Color Space Manipulation",
"Authors@R" : "c(person(given = \"Ross\", family = \"Ihaka\", role = \"aut\", email = \"ihaka@stat.auckland.ac.nz\"),\n person(given = \"Paul\", family = \"Murrell\", role = \"aut\", email = \"paul@stat.auckland.ac.nz\"),\n person(given = \"Kurt\", family = \"Hornik\", role = \"aut\", email = \"Kurt.Hornik@R-project.org\"),\n person(given = c(\"Jason\", \"C.\"), family = \"Fisher\", role = \"aut\", email = \"jfisher@usgs.gov\"),\n person(given = \"Reto\", family = \"Stauffer\", role = \"aut\", email = \"Reto.Stauffer@uibk.ac.at\"),\n person(given = \"Achim\", family = \"Zeileis\", role = c(\"aut\", \"cre\"), email = \"Achim.Zeileis@R-project.org\"))",
"Description" : "Carries out mapping between assorted color spaces including\n RGB, HSV, HLS, CIEXYZ, CIELUV, HCL (polar CIELUV),\n\t CIELAB and polar CIELAB. Qualitative, sequential, and\n\t diverging color palettes based on HCL colors are provided\n\t along with an interactive palette picker (with either a Tcl/Tk\n\t or a shiny GUI).",
"Depends" : "R (>= 2.13.0), methods",
"Imports" : "graphics, grDevices",
"Suggests" : "datasets, stats, utils, KernSmooth, MASS, kernlab, mvtnorm,\nvcd, dichromat, tcltk, shiny, shinyjs",
"License" : "BSD_3_clause + file LICENSE",
"URL" : "https://hclwizard.org/",
"LazyData" : "yes",
"NeedsCompilation" : "yes",
"Packaged" : "2016-12-14 22:11:46 UTC; zeileis",
"Author" : "Ross Ihaka [aut],\n Paul Murrell [aut],\n Kurt Hornik [aut],\n Jason C. Fisher [aut],\n Reto Stauffer [aut],\n Achim Zeileis [aut, cre]",
"Maintainer" : "Achim Zeileis <Achim.Zeileis@R-project.org>",
"Repository" : "CRAN",
"Date/Publication" : "2016-12-14 23:28:25",
"Built" : "R 3.3.2; x86_64-apple-darwin13.4.0; 2016-12-17 14:56:12 UTC; unix"
}
},
"dichromat" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "dichromat",
"Version" : "2.0-0",
"Date" : "2013-01-23",
"Title" : "Color Schemes for Dichromats",
"Authors@R" : "c(person(given = \"Thomas\", family = \"Lumley\", role =\n c(\"aut\", \"cre\"), email = \"tlumley@u.washington.edu\"),\n person(given = \"Ken\", family = \"Knoblauch\", role = \"ctb\", email\n = \"ken.knoblauch@inserm.fr\"), person(given = \"Scott\", family =\n \"Waichler\", role = \"ctb\", email = \"scott.waichler@pnl.gov\"),\n person(given = \"Achim\", family = \"Zeileis\", role = \"ctb\", email\n = \"Achim.Zeileis@R-project.org\"))",
"Description" : "Collapse red-green or green-blue distinctions to simulate\n the effects of different types of color-blindness.",
"Depends" : "R (>= 2.10), stats",
"License" : "GPL-2",
"LazyLoad" : "Yes",
"Packaged" : "2013-01-23 06:25:04 UTC; zeileis",
"Author" : "Thomas Lumley [aut, cre], Ken Knoblauch [ctb], Scott Waichler\n [ctb], Achim Zeileis [ctb]",
"Maintainer" : "Thomas Lumley <tlumley@u.washington.edu>",
"Repository" : "CRAN",
"Date/Publication" : "2013-01-24 08:18:09",
"Built" : "R 3.3.0; ; 2016-05-04 14:03:40 UTC; unix"
}
},
"digest" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "digest",
"Author" : "Dirk Eddelbuettel <edd@debian.org> with contributions \n by Antoine Lucas, Jarek Tuszynski, Henrik Bengtsson, Simon Urbanek,\n Mario Frasca, Bryan Lewis, Murray Stokely, Hannes Muehleisen,\n Duncan Murdoch, Jim Hester, Wush Wu, Qiang Kou, Thierry Onkelinx, \n Michel Lang and Viliam Simko.",
"Version" : "0.6.12",
"Date" : "2017-01-26",
"Maintainer" : "Dirk Eddelbuettel <edd@debian.org>",
"Title" : "Create Compact Hash Digests of R Objects",
"Description" : "Implementation of a function 'digest()' for the creation \n of hash digests of arbitrary R objects (using the 'md5', 'sha-1', 'sha-256', \n 'crc32', 'xxhash' and 'murmurhash' algorithms) permitting easy comparison of R\n language objects, as well as a function 'hmac()' to create hash-based\n message authentication code. Please note that this package is not meant to\n be deployed for cryptographic purposes for which more comprehensive (and\n widely tested) libraries such as 'OpenSSL' should be used.",
"URL" : "http://dirk.eddelbuettel.com/code/digest.html",
"BugReports" : "https://github.com/eddelbuettel/digest/issues",
"Depends" : "R (>= 2.4.1)",
"License" : "GPL (>= 2)",
"Suggests" : "knitr, rmarkdown",
"VignetteBuilder" : "knitr",
"NeedsCompilation" : "yes",
"Packaged" : "2017-01-26 13:52:49.564188 UTC; edd",
"Repository" : "CRAN",
"Date/Publication" : "2017-01-27 10:18:01",
"Built" : "R 3.3.2; x86_64-apple-darwin13.4.0; 2017-01-28 11:28:09 UTC; unix"
}
},
"gtable" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "gtable",
"Version" : "0.2.0",
"Title" : "Arrange 'Grobs' in Tables",
"Description" : "Tools to make it easier to work with \"tables\" of 'grobs'.",
"Authors@R" : "person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", c(\"aut\", \"cre\"))",
"Depends" : "R (>= 2.14)",
"Imports" : "grid",
"Suggests" : "testthat, covr",
"License" : "GPL-2",
"Collate" : "'add-grob.r' 'add-rows-cols.r' 'add-space.r' 'grid.r'\n'gtable-layouts.r' 'gtable.r' 'rbind-cbind.r' 'utils.r'\n'trim.r' 'filter.r' 'align.r' 'padding.r' 'z.r'",
"RoxygenNote" : "5.0.1",
"NeedsCompilation" : "no",
"Packaged" : "2016-02-26 13:06:10 UTC; hadley",
"Author" : "Hadley Wickham [aut, cre]",
"Maintainer" : "Hadley Wickham <hadley@rstudio.com>",
"Repository" : "CRAN",
"Date/Publication" : "2016-02-26 15:23:14",
"Built" : "R 3.3.0; ; 2016-05-04 14:03:03 UTC; unix"
}
},
"htmltools" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "htmltools",
"Type" : "Package",
"Title" : "Tools for HTML",
"Version" : "0.3.5",
"Date" : "2016-03-19",
"Author" : "RStudio, Inc.",
"Maintainer" : "Joe Cheng <joe@rstudio.com>",
"Description" : "Tools for HTML generation and output.",
"Depends" : "R (>= 2.14.1)",
"Imports" : "utils, digest, Rcpp",
"Suggests" : "markdown, testthat",
"Enhances" : "knitr",
"License" : "GPL (>= 2)",
"URL" : "https://github.com/rstudio/htmltools",
"BugReports" : "https://github.com/rstudio/htmltools/issues",
"RoxygenNote" : "5.0.1",
"LinkingTo" : "Rcpp",
"NeedsCompilation" : "yes",
"Packaged" : "2016-03-21 21:26:31 UTC; jcheng",
"Repository" : "CRAN",
"Date/Publication" : "2016-03-21 23:36:11",
"Built" : "R 3.3.0; x86_64-apple-darwin13.4.0; 2016-05-04 14:23:33 UTC; unix"
}
},
"httpuv" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "httpuv",
"Type" : "Package",
"Title" : "HTTP and WebSocket Server Library",
"Version" : "1.3.3",
"Date" : "2015-08-03",
"Author" : "RStudio, Inc.",
"Copyright" : "RStudio, Inc.; Joyent, Inc.; Nginx Inc.; Igor Sysoev; Niels\nProvos; Internet Systems Consortium, Inc.; Alexander Chemeris",
"Maintainer" : "Joe Cheng <joe@rstudio.com>",
"Description" : "Provides low-level socket and protocol support for handling\n HTTP and WebSocket requests directly from within R. It is primarily\n intended as a building block for other packages, rather than making it\n particularly easy to create complete web applications using httpuv alone.\n httpuv is built on top of the libuv and http-parser C libraries, both of\n which were developed by Joyent, Inc. (See LICENSE file for libuv and\n http-parser license information.)",
"License" : "GPL-3 | file LICENSE",
"Depends" : "R (>= 2.15.1), methods",
"Imports" : "Rcpp (>= 0.11.0), utils",
"LinkingTo" : "Rcpp",
"URL" : "https://github.com/rstudio/httpuv",
"SystemRequirements" : "GNU make",
"NeedsCompilation" : "yes",
"Packaged" : "2015-08-03 18:49:59 UTC; jcheng",
"Repository" : "CRAN",
"Date/Publication" : "2015-08-04 00:32:50",
"Built" : "R 3.3.0; x86_64-apple-darwin13.4.0; 2016-05-04 14:23:35 UTC; unix"
}
},
"jsonlite" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "jsonlite",
"Version" : "1.3",
"Title" : "A Robust, High Performance JSON Parser and Generator for R",
"License" : "MIT + file LICENSE",
"NeedsCompilation" : "yes",
"Depends" : "methods",
"Author" : "Jeroen Ooms, Duncan Temple Lang, Lloyd Hilaiel",
"URL" : "https://arxiv.org/abs/1403.2805,\nhttps://www.opencpu.org/posts/jsonlite-a-smarter-json-encoder",
"BugReports" : "http://github.com/jeroenooms/jsonlite/issues",
"Maintainer" : "Jeroen Ooms <jeroen@berkeley.edu>",
"VignetteBuilder" : "knitr, R.rsp",
"Description" : "A fast JSON parser and generator optimized for statistical data\n and the web. Started out as a fork of 'RJSONIO', but has been completely\n rewritten in recent versions. The package offers flexible, robust, high\n performance tools for working with JSON in R and is particularly powerful\n for building pipelines and interacting with a web API. The implementation is\n based on the mapping described in the vignette (Ooms, 2014). In addition to\n converting JSON data from/to R objects, 'jsonlite' contains functions to\n stream, validate, and prettify JSON data. The unit tests included with the\n package verify that all edge cases are encoded and decoded consistently for\n use with dynamic data in systems and applications.",
"Suggests" : "httr, curl, plyr, testthat, knitr, rmarkdown, R.rsp",
"RoxygenNote" : "6.0.1",
"Packaged" : "2017-02-27 18:17:23 UTC; jeroen",
"Repository" : "CRAN",
"Date/Publication" : "2017-02-28 12:12:39",
"Built" : "R 3.3.2; x86_64-apple-darwin13.4.0; 2017-02-28 17:31:25 UTC; unix"
}
},
"labeling" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "labeling",
"Type" : "Package",
"Title" : "Axis Labeling",
"Version" : "0.3",
"Date" : "2014-08-22",
"Author" : "Justin Talbot",
"Maintainer" : "Justin Talbot <justintalbot@gmail.com>",
"Description" : "Provides a range of axis labeling algorithms",
"License" : "MIT + file LICENSE | Unlimited",
"LazyLoad" : "no",
"Collate" : "'labeling.R'",
"Repository" : "CRAN",
"Repository/R-Forge/Project" : "labeling",
"Repository/R-Forge/Revision" : "16",
"Repository/R-Forge/DateTimeStamp" : "2014-08-23 05:53:23",
"Date/Publication" : "2014-08-23 14:57:53",
"Packaged" : "2014-08-23 06:15:07 UTC; rforge",
"NeedsCompilation" : "no",
"Built" : "R 3.3.0; ; 2016-05-04 14:04:06 UTC; unix"
}
},
"mime" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "mime",
"Type" : "Package",
"Title" : "Map Filenames to MIME Types",
"Version" : "0.5",
"Date" : "2016-07-07",
"Authors@R" : "c(person(\"Jeffrey\", \"Horner\", role = \"ctb\"),\n person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = \"xie@yihui.name\"))",
"Maintainer" : "Yihui Xie <xie@yihui.name>",
"Description" : "Guesses the MIME type from a filename extension using the data\n derived from /etc/mime.types in UNIX-type systems.",
"Imports" : "tools",
"License" : "GPL",
"URL" : "https://github.com/yihui/mime",
"BugReports" : "https://github.com/yihui/mime/issues",
"LazyData" : "TRUE",
"RoxygenNote" : "5.0.1",
"NeedsCompilation" : "yes",
"Packaged" : "2016-07-07 04:44:41 UTC; yihui",
"Author" : "Jeffrey Horner [ctb],\n Yihui Xie [aut, cre]",
"Repository" : "CRAN",
"Date/Publication" : "2016-07-07 07:38:00",
"Built" : "R 3.3.0; x86_64-apple-darwin13.4.0; 2016-07-08 11:11:47 UTC; unix"
}
},
"munsell" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "munsell",
"Type" : "Package",
"Title" : "Utilities for Using Munsell Colours",
"Version" : "0.4.3",
"Author" : "Charlotte Wickham <cwickham@gmail.com>",
"Maintainer" : "Charlotte Wickham <cwickham@gmail.com>",
"Description" : "Provides easy access to, and manipulation of, the Munsell \n colours. Provides a mapping between Munsell's \n original notation (e.g. \"5R 5/10\") and hexadecimal strings suitable \n for use directly in R graphics. Also provides utilities \n to explore slices through the Munsell colour tree, to transform \n Munsell colours and display colour palettes.",
"Suggests" : "ggplot2, testthat",
"Imports" : "colorspace, methods",
"License" : "MIT + file LICENSE",
"RoxygenNote" : "5.0.1",
"NeedsCompilation" : "no",
"Packaged" : "2016-02-12 19:58:18 UTC; wickhamc",
"Repository" : "CRAN",
"Date/Publication" : "2016-02-13 00:46:00",
"Built" : "R 3.3.0; ; 2016-05-05 02:36:33 UTC; unix"
}
},
"packrat" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "packrat",
"Type" : "Package",
"Title" : "A Dependency Management System for Projects and their R Package\nDependencies",
"Version" : "0.4.8-1",
"Author" : "Kevin Ushey, Jonathan McPherson, Joe Cheng, Aron Atkins, JJ Allaire",
"Maintainer" : "Kevin Ushey <kevin@rstudio.com>",
"Description" : "Manage the R packages your project depends\n on in an isolated, portable, and reproducible way.",
"License" : "GPL-2",
"Depends" : "R (>= 3.0.0)",
"Imports" : "tools, utils",
"Suggests" : "testthat (>= 0.7), devtools, httr, knitr, rmarkdown",
"Enhances" : "BiocInstaller",
"URL" : "https://github.com/rstudio/packrat/",
"BugReports" : "https://github.com/rstudio/packrat/issues",
"RoxygenNote" : "5.0.1",
"NeedsCompilation" : "no",
"Packaged" : "2016-09-07 21:30:04 UTC; kevin",
"Repository" : "CRAN",
"Date/Publication" : "2016-09-07 23:37:52",
"Built" : "R 3.3.0; ; 2016-09-08 11:40:10 UTC; unix"
}
},
"pheatmap" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "pheatmap",
"Type" : "Package",
"Title" : "Pretty Heatmaps",
"Version" : "1.0.8",
"Date" : "2015-07-02",
"Author" : "Raivo Kolde",
"Maintainer" : "Raivo Kolde <rkolde@gmail.com>",
"Depends" : "R (>= 2.0)",
"Description" : "Implementation of heatmaps that offers more control\n over dimensions and appearance.",
"Imports" : "grid, RColorBrewer, scales, gtable, stats, grDevices, graphics",
"License" : "GPL-2",
"LazyLoad" : "yes",
"NeedsCompilation" : "no",
"Packaged" : "2015-12-11 14:36:08 UTC; kolde",
"Repository" : "CRAN",
"Date/Publication" : "2015-12-11 16:50:10",
"Built" : "R 3.3.0; ; 2016-05-05 09:30:49 UTC; unix"
}
},
"plyr" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "plyr",
"Version" : "1.8.4",
"Title" : "Tools for Splitting, Applying and Combining Data",
"Description" : "A set of tools that solves a common set of problems: you\n need to break a big problem down into manageable pieces, operate on each\n piece and then put all the pieces back together. For example, you might\n want to fit a model to each spatial location or time point in your study,\n summarise data by panels or collapse high-dimensional arrays to simpler\n summary statistics. The development of 'plyr' has been generously supported\n by 'Becton Dickinson'.",
"Authors@R" : "person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", c(\"aut\", \"cre\"))",
"URL" : "http://had.co.nz/plyr, https://github.com/hadley/plyr",
"BugReports" : "https://github.com/hadley/plyr/issues",
"Depends" : "R (>= 3.1.0)",
"Imports" : "Rcpp (>= 0.11.0)",
"LinkingTo" : "Rcpp",
"Suggests" : "abind, testthat, tcltk, foreach, doParallel, itertools,\niterators, covr",
"License" : "MIT + file LICENSE",
"LazyData" : "true",
"RoxygenNote" : "5.0.1",
"NeedsCompilation" : "yes",
"Packaged" : "2016-06-07 19:58:36 UTC; hadley",
"Author" : "Hadley Wickham [aut, cre]",
"Maintainer" : "Hadley Wickham <hadley@rstudio.com>",
"Repository" : "CRAN",
"Date/Publication" : "2016-06-08 10:40:15",
"Built" : "R 3.3.0; x86_64-apple-darwin13.4.0; 2016-06-09 09:08:22 UTC; unix"
}
},
"preprocessCore" : {
"Source" : "Bioconductor",
"Repository" : "https://bioconductor.org/packages/3.3/bioc/src/contrib",
"description" : {
"Package" : "preprocessCore",
"Version" : "1.34.0",
"Title" : "A collection of pre-processing functions",
"Author" : "Benjamin Milo Bolstad <bmb@bmbolstad.com>",
"Maintainer" : "Benjamin Milo Bolstad <bmb@bmbolstad.com>",
"Imports" : "stats",
"Description" : "A library of core preprocessing routines ",
"License" : "LGPL (>= 2)",
"URL" : "https://github.com/bmbolstad/preprocessCore",
"Collate" : "normalize.quantiles.R quantile_extensions.R\nrma.background.correct.R rcModel.R colSummarize.R\nsubColSummarize.R plmr.R plmd.R",
"LazyLoad" : "yes",
"biocViews" : "Infrastructure",
"NeedsCompilation" : "yes",
"Packaged" : "2016-05-04 01:39:18 UTC; biocbuild",
"Built" : "R 3.3.0; x86_64-apple-darwin13.4.0; 2016-05-04 14:56:54 UTC; unix"
}
},
"rafalib" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "rafalib",
"Version" : "1.0.0",
"Title" : "Convenience Functions for Routine Data Exploration",
"Description" : "A series of shortcuts for routine tasks originally developed by Rafael A. Irizarry to facilitate data exploration. ",
"Author" : "Rafael A. Irizarry and Michael I. Love",
"Maintainer" : "Rafael A. Irizarry <rafa@jimmy.harvard.edu>",
"Imports" : "RColorBrewer",
"License" : "Artistic-2.0",
"LazyData" : "yes",
"NeedsCompilation" : "no",
"Packaged" : "2015-08-08 17:15:39 UTC; ririzarr",
"Repository" : "CRAN",
"Date/Publication" : "2015-08-09 00:00:40",
"Built" : "R 3.3.0; ; 2016-05-04 23:29:52 UTC; unix"
}
},
"scales" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "scales",
"Version" : "0.4.1",
"Authors@R" : "c(\n person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", c(\"aut\", \"cre\")),\n person(\"RStudio\", role = \"cph\")\n )",
"Title" : "Scale Functions for Visualization",
"Description" : "Graphical scales map data to aesthetics, and provide\n methods for automatically determining breaks and labels\n for axes and legends.",
"URL" : "https://github.com/hadley/scales",
"BugReports" : "https://github.com/hadley/scales/issues",
"Depends" : "R (>= 2.13)",
"Imports" : "RColorBrewer, dichromat, plyr, munsell (>= 0.2), labeling,\nmethods, Rcpp",
"LinkingTo" : "Rcpp",
"Suggests" : "testthat (>= 0.8), covr, hms",
"License" : "MIT + file LICENSE",
"LazyLoad" : "yes",
"RoxygenNote" : "5.0.1",
"NeedsCompilation" : "yes",
"Packaged" : "2016-11-08 19:11:18 UTC; hadley",
"Author" : "Hadley Wickham [aut, cre],\n RStudio [cph]",
"Maintainer" : "Hadley Wickham <hadley@rstudio.com>",
"Repository" : "CRAN",
"Date/Publication" : "2016-11-09 18:28:56",
"Built" : "R 3.3.2; x86_64-apple-darwin13.4.0; 2016-11-10 10:44:34 UTC; unix"
}
},
"shiny" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "shiny",
"Type" : "Package",
"Title" : "Web Application Framework for R",
"Version" : "1.0.0",
"Authors@R" : "c(\n person(\"Winston\", \"Chang\", role = c(\"aut\", \"cre\"), email = \"winston@rstudio.com\"),\n person(\"Joe\", \"Cheng\", role = \"aut\", email = \"joe@rstudio.com\"),\n person(\"JJ\", \"Allaire\", role = \"aut\", email = \"jj@rstudio.com\"),\n person(\"Yihui\", \"Xie\", role = \"aut\", email = \"yihui@rstudio.com\"),\n person(\"Jonathan\", \"McPherson\", role = \"aut\", email = \"jonathan@rstudio.com\"),\n person(family = \"RStudio\", role = \"cph\"),\n person(family = \"jQuery Foundation\", role = \"cph\",\n comment = \"jQuery library and jQuery UI library\"),\n person(family = \"jQuery contributors\", role = c(\"ctb\", \"cph\"),\n comment = \"jQuery library; authors listed in inst/www/shared/jquery-AUTHORS.txt\"),\n person(family = \"jQuery UI contributors\", role = c(\"ctb\", \"cph\"),\n comment = \"jQuery UI library; authors listed in inst/www/shared/jqueryui/AUTHORS.txt\"),\n person(\"Mark\", \"Otto\", role = \"ctb\",\n comment = \"Bootstrap library\"),\n person(\"Jacob\", \"Thornton\", role = \"ctb\",\n comment = \"Bootstrap library\"),\n person(family = \"Bootstrap contributors\", role = \"ctb\",\n comment = \"Bootstrap library\"),\n person(family = \"Twitter, Inc\", role = \"cph\",\n comment = \"Bootstrap library\"),\n person(\"Alexander\", \"Farkas\", role = c(\"ctb\", \"cph\"),\n comment = \"html5shiv library\"),\n person(\"Scott\", \"Jehl\", role = c(\"ctb\", \"cph\"),\n comment = \"Respond.js library\"),\n person(\"Stefan\", \"Petre\", role = c(\"ctb\", \"cph\"),\n comment = \"Bootstrap-datepicker library\"),\n person(\"Andrew\", \"Rowls\", role = c(\"ctb\", \"cph\"),\n comment = \"Bootstrap-datepicker library\"),\n person(\"Dave\", \"Gandy\", role = c(\"ctb\", \"cph\"),\n comment = \"Font-Awesome font\"),\n person(\"Brian\", \"Reavis\", role = c(\"ctb\", \"cph\"),\n comment = \"selectize.js library\"),\n person(\"Kristopher Michael\", \"Kowal\", role = c(\"ctb\", \"cph\"),\n comment = \"es5-shim library\"),\n person(family = \"es5-shim contributors\", role = c(\"ctb\", \"cph\"),\n comment = \"es5-shim library\"),\n person(\"Denis\", \"Ineshin\", role = c(\"ctb\", \"cph\"),\n comment = \"ion.rangeSlider library\"),\n person(\"Sami\", \"Samhuri\", role = c(\"ctb\", \"cph\"),\n comment = \"Javascript strftime library\"),\n person(family = \"SpryMedia Limited\", role = c(\"ctb\", \"cph\"),\n comment = \"DataTables library\"),\n person(\"John\", \"Fraser\", role = c(\"ctb\", \"cph\"),\n comment = \"showdown.js library\"),\n person(\"John\", \"Gruber\", role = c(\"ctb\", \"cph\"),\n comment = \"showdown.js library\"),\n person(\"Ivan\", \"Sagalaev\", role = c(\"ctb\", \"cph\"),\n comment = \"highlight.js library\"),\n person(family = \"R Core Team\", role = c(\"ctb\", \"cph\"),\n comment = \"tar implementation from R\")\n )",
"Description" : "Makes it incredibly easy to build interactive web\n applications with R. Automatic \"reactive\" binding between inputs and\n outputs and extensive pre-built widgets make it possible to build\n beautiful, responsive, and powerful applications with minimal effort.",
"License" : "GPL-3 | file LICENSE",
"Depends" : "R (>= 3.0.0), methods",
"Imports" : "utils, httpuv (>= 1.3.3), mime (>= 0.3), jsonlite (>= 0.9.16),\nxtable, digest, htmltools (>= 0.3.5), R6 (>= 2.0), sourcetools",
"Suggests" : "datasets, Cairo (>= 1.5-5), testthat, knitr (>= 1.6),\nmarkdown, rmarkdown, ggplot2, magrittr",
"URL" : "http://shiny.rstudio.com",
"BugReports" : "https://github.com/rstudio/shiny/issues",
"Collate" : "'app.R' 'bookmark-state-local.R' 'stack.R' 'bookmark-state.R'\n'bootstrap-layout.R' 'conditions.R' 'map.R' 'globals.R'\n'utils.R' 'bootstrap.R' 'cache.R' 'diagnose.R' 'fileupload.R'\n'graph.R' 'hooks.R' 'html-deps.R' 'htmltools.R'\n'image-interact-opts.R' 'image-interact.R' 'imageutils.R'\n'input-action.R' 'input-checkbox.R' 'input-checkboxgroup.R'\n'input-date.R' 'input-daterange.R' 'input-file.R'\n'input-numeric.R' 'input-password.R' 'input-radiobuttons.R'\n'input-select.R' 'input-slider.R' 'input-submit.R'\n'input-text.R' 'input-textarea.R' 'input-utils.R' 'insert-ui.R'\n'jqueryui.R' 'middleware-shiny.R' 'middleware.R' 'modal.R'\n'modules.R' 'notifications.R' 'priorityqueue.R' 'progress.R'\n'react.R' 'reactive-domains.R' 'reactives.R' 'render-plot.R'\n'render-table.R' 'run-url.R' 'serializers.R'\n'server-input-handlers.R' 'server.R' 'shiny-options.R'\n'shiny.R' 'shinyui.R' 'shinywrappers.R' 'showcase.R' 'tar.R'\n'test-export.R' 'timer.R' 'update-input.R'",
"RoxygenNote" : "5.0.1",
"NeedsCompilation" : "no",
"Packaged" : "2017-01-09 19:02:04 UTC; winston",
"Author" : "Winston Chang [aut, cre],\n Joe Cheng [aut],\n JJ Allaire [aut],\n Yihui Xie [aut],\n Jonathan McPherson [aut],\n RStudio [cph],\n jQuery Foundation [cph] (jQuery library and jQuery UI library),\n jQuery contributors [ctb, cph] (jQuery library; authors listed in\n inst/www/shared/jquery-AUTHORS.txt),\n jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in\n inst/www/shared/jqueryui/AUTHORS.txt),\n Mark Otto [ctb] (Bootstrap library),\n Jacob Thornton [ctb] (Bootstrap library),\n Bootstrap contributors [ctb] (Bootstrap library),\n Twitter, Inc [cph] (Bootstrap library),\n Alexander Farkas [ctb, cph] (html5shiv library),\n Scott Jehl [ctb, cph] (Respond.js library),\n Stefan Petre [ctb, cph] (Bootstrap-datepicker library),\n Andrew Rowls [ctb, cph] (Bootstrap-datepicker library),\n Dave Gandy [ctb, cph] (Font-Awesome font),\n Brian Reavis [ctb, cph] (selectize.js library),\n Kristopher Michael Kowal [ctb, cph] (es5-shim library),\n es5-shim contributors [ctb, cph] (es5-shim library),\n Denis Ineshin [ctb, cph] (ion.rangeSlider library),\n Sami Samhuri [ctb, cph] (Javascript strftime library),\n SpryMedia Limited [ctb, cph] (DataTables library),\n John Fraser [ctb, cph] (showdown.js library),\n John Gruber [ctb, cph] (showdown.js library),\n Ivan Sagalaev [ctb, cph] (highlight.js library),\n R Core Team [ctb, cph] (tar implementation from R)",
"Maintainer" : "Winston Chang <winston@rstudio.com>",
"Repository" : "CRAN",
"Date/Publication" : "2017-01-12 00:49:04",
"Built" : "R 3.3.2; ; 2017-01-12 11:39:16 UTC; unix"
}
},
"sourcetools" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "sourcetools",
"Type" : "Package",
"Title" : "Tools for Reading, Tokenizing and Parsing R Code",
"Version" : "0.1.5",
"Author" : "Kevin Ushey",
"Maintainer" : "Kevin Ushey <kevinushey@gmail.com>",
"Description" : "Tools for the reading and tokenization of R code. The\n 'sourcetools' package provides both an R and C++ interface for the tokenization\n of R code, and helpers for interacting with the tokenized representation of R\n code.",
"License" : "MIT + file LICENSE",
"LazyData" : "TRUE",
"Depends" : "R (>= 3.0.2)",
"Suggests" : "testthat",
"RoxygenNote" : "5.0.1",
"BugReports" : "https://github.com/kevinushey/sourcetools/issues",
"Encoding" : "UTF-8",
"NeedsCompilation" : "yes",
"Packaged" : "2016-09-14 22:38:37 UTC; kevin",
"Repository" : "CRAN",
"Date/Publication" : "2016-09-15 03:07:07",
"Built" : "R 3.3.0; x86_64-apple-darwin13.4.0; 2016-09-15 12:52:49 UTC; unix"
}
},
"xtable" : {
"Source" : "CRAN",
"Repository" : "https://cran.rstudio.com/",
"description" : {
"Package" : "xtable",
"Version" : "1.8-2",
"Date" : "2016-01-08",
"Title" : "Export Tables to LaTeX or HTML",
"Author" : "David B. Dahl <dahl@stat.byu.edu>",
"Maintainer" : "David Scott <d.scott@auckland.ac.nz>",
"Imports" : "stats, utils",
"Suggests" : "knitr, lsmeans, spdep, splm, sphet, plm, zoo, survival",
"VignetteBuilder" : "knitr",
"Description" : "Coerce data to LaTeX and HTML tables.",
"URL" : "http://xtable.r-forge.r-project.org/",
"Depends" : "R (>= 2.10.0)",
"License" : "GPL (>= 2)",
"Repository" : "CRAN",
"NeedsCompilation" : "no",
"Packaged" : "2016-02-02 02:58:02 UTC; dsco036",
"Date/Publication" : "2016-02-05 19:22:18",
"Built" : "R 3.3.0; ; 2016-05-04 13:58:57 UTC; unix"
}
}
},
"files" : {
"data/lin2_gene_QNlog2trans.RDS" : {
"checksum" : "456b5e120cbaa8ee8388f5c3ca3c23f5"
},
"data/lin2_pd.RDS" : {
"checksum" : "cfea109ee4eccbea164fab39bac2ae16"
},
"data/lin2_probe_QNlog2trans.RDS" : {
"checksum" : "edcdb31a5e8a0d53b2038e04e3f3a217"
},
"data/mah_genes.RDS" : {
"checksum" : "2967ace622a39cbee45af6eaa93c1030"
},
"packrat/desc/colorspace" : {
"checksum" : "5721ffa2b0451f3a44ec6a999e18f7c9"
},
"packrat/desc/dichromat" : {
"checksum" : "cf6d3af84838d8982c4622483b1754df"
},
"packrat/desc/digest" : {
"checksum" : "5d805938254ed0bdc015fc0c379de307"
},
"packrat/desc/gtable" : {
"checksum" : "77a0a875ff539f5a910164ea2a9ff59f"
},
"packrat/desc/htmltools" : {
"checksum" : "e604f6096a2f89663f1b0e3ca7fd1193"
},
"packrat/desc/httpuv" : {
"checksum" : "fdbdc71b9185a4d8b3aa0f7912096b43"
},
"packrat/desc/jsonlite" : {
"checksum" : "339d1a1fcc32c9c78c2b4b2c3833685d"
},
"packrat/desc/labeling" : {
"checksum" : "6c2f27ebac26cd41684f200e6883e347"
},
"packrat/desc/mime" : {
"checksum" : "d273cef9a61aa1d449b6fc784e4c2601"
},
"packrat/desc/munsell" : {
"checksum" : "a225cfb79d8298815cba8059b8044b76"
},
"packrat/desc/packrat" : {
"checksum" : "2ad772a439b0c19c3f1a3e6f8a701ffe"
},
"packrat/desc/pheatmap" : {
"checksum" : "b0c4634b291cb8e250fb02073d39e253"
},
"packrat/desc/plyr" : {
"checksum" : "1a38f5e606ed45ae7beb272976357535"
},
"packrat/desc/preprocessCore" : {
"checksum" : "43032ce4801d4679d6074335e1d6f4ce"
},
"packrat/desc/R6" : {
"checksum" : "cced31bf483c9eac847c616df52de968"
},
"packrat/desc/rafalib" : {
"checksum" : "d299912f31b2d2a6df311c094c46ec62"
},
"packrat/desc/RColorBrewer" : {
"checksum" : "c72d73260c4b310481611fc9625fe7fd"
},
"packrat/desc/Rcpp" : {
"checksum" : "b8b1631e922d192734eb6954b7ec2fd9"
},
"packrat/desc/scales" : {
"checksum" : "91be45fecc9b3d9a991a757ea0c9dd93"
},
"packrat/desc/shiny" : {
"checksum" : "dd9c39208b040fabaadd33aebbcd4abd"
},
"packrat/desc/sourcetools" : {
"checksum" : "cb5c4efff155636bcac46a6b0a5fd5e3"
},
"packrat/desc/xtable" : {
"checksum" : "37067b8e71f324678777184359372588"
},
"packrat/packrat.lock" : {
"checksum" : "c75b97c441de5062bde26050a06a3dbc"
},
"server.R" : {
"checksum" : "52baad8c7b87693b02073aa5197d1cb4"
},
"src/app_setup.R" : {
"checksum" : "451146839e4d7a2f2dadd1cf6213afd5"
},
"ui.R" : {
"checksum" : "b9e0482c3895f6be75eba1b50d613c5a"
}
},
"users" : null
}