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setup.py
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import setuptools
with open("README.md", "r", encoding="utf-8") as fh:
long_description = fh.read()
setuptools.setup(
name='metatime',
version='1.3.0',
author='Yi Zhang',
author_email='wingsyiz@gmail.com',
description='Beta MetaTiME: annotate TME scRNA cell states',
long_description = long_description,
long_description_content_type="text/markdown",
url='https://github.com/yi-zhang/MetaTiME.git',
classifiers=[
"Development Status :: 3 - Alpha",
"Intended Audience :: Science/Research",
"Topic :: Scientific/Engineering :: Bio-Informatics",
"Natural Language :: English",
"Programming Language :: Python :: 3",
"License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)",
"Operating System :: OS Independent",
],
packages=['metatime'],
package_data = {
'metatime': ['pretrained/mec/*tsv']
},
python_requires='>=3.6',
install_requires=['pandas','scanpy','anndata','matplotlib','adjustText', 'leidenalg', 'harmonypy', 'scipy','seaborn'],
)