.travis.yml

sudo: required
language: java
jdk: oraclejdk7
services:
    - docker

cache:
    directories:
        - $HOME/.m2
        - $HOME/maven

env:
    - MAVEN_VERSION=3.3.3 TEST=core
    - MAVEN_VERSION=3.3.3 TEST=python-validator
    - MAVEN_VERSION=3.3.3 TEST=end-to-end

install:
    # install maven
    - |
        if [[ "${TEST}" == core || "${TEST}" == end-to-end ]]
        then
            mkdir -p ~/maven
            test -d ~/maven/$MAVEN_VERSION/bin || { \
                find ~/maven -mindepth 1 -delete && \
                mkdir -p ~/maven/$MAVEN_VERSION && \
                wget -O - http://www.eu.apache.org/dist/maven/maven-3/$MAVEN_VERSION/binaries/apache-maven-$MAVEN_VERSION-bin.tar.gz | \
                    tar -C ~/maven/$MAVEN_VERSION --strip-components=1 -xzf -; }
        fi
    # install dependencies for the python unit tests
    - |
        if [[ "${TEST}" == python-validator ]]
        then
            sudo -H pip install -r requirements.txt
        fi

before_script:
    # run mysql db for core tests
    - |
        if [[ "${TEST}" == core ]]
        then
            docker run \
                     --name core-tests-mysql \
                     --net=host \
                     -p 3306:3306 \
                     -e MYSQL_USER=cbio_user \
                     -e MYSQL_ALLOW_EMPTY_PASSWORD=yes \
                     -e MYSQL_PASSWORD=somepassword \
                     -e MYSQL_DATABASE=cgds_test \
                     -d \
                     mysql:5.7.12
         fi

script:
    - export PORTAL_HOME=$(pwd)
    # run the python unit tests (for the dataset validation scripts)
    - |
        if [[ "${TEST}" == python-validator ]]
        then
            export PYTHONPATH=$PYTHONPATH:$PORTAL_HOME/core/src/main/scripts:/usr/local/lib/python2.7/dist-packages:/usr/lib/python2.7/dist-packages && \
            cd $PORTAL_HOME/core/src/test/scripts/ && \
            $PORTAL_HOME/core/src/test/scripts/./unit_tests_validate_data.py && \
            $PORTAL_HOME/core/src/test/scripts/./system_tests_validate_data.py && \
            cd $PORTAL_HOME
        fi
    # use .travis/settings.xml for core tests
    - |
        if [[ "${TEST}" == core ]]
        then
            mkdir -p ~/.m2 && \
            cp .travis/settings.xml ~/.m2
        fi
    # use EXAMPLE properties files
    - |
        if [[ "${TEST}" == core || "${TEST}" == end-to-end ]]
        then
            cp $PORTAL_HOME/src/main/resources/portal.properties.EXAMPLE $PORTAL_HOME/src/main/resources/portal.properties && \
            cp $PORTAL_HOME/src/main/resources/log4j.properties.EXAMPLE $PORTAL_HOME/src/main/resources/log4j.properties
        fi
    # make sure mysql container is running
    - |
        if [[ "${TEST}" == core ]]
        then
            while [[ 1 != $(echo 'select 1;' | \
                           mysql --user cbio_user -P 3306 -h 127.0.0.1 --password=somepassword cgds_test | head -1 2> /dev/null) ]]
            do 
                sleep 5s
            done
        fi
    # core tests
    - |
        if [[ "${TEST}" == core ]]
        then
            ~/maven/$MAVEN_VERSION/bin/mvn \
                -e \
                -DPORTAL_HOME=$PORTAL_HOME \
                -Ppublic \
                -Dfinal.war.name=cbioportal \
                -Ddb.user=cbio_user \
                -Ddb.password=somepassword \
                -Ddb.host=127.0.0.1 \
                -Ddb.connection_string=jdbc:mysql://127.0.0.1:3306/ \
                clean test
        fi
    # end-to-end tests
    # compile war to use amazon db
    - |
        if [[ "${TEST}" == end-to-end ]]
        then
            ~/maven/$MAVEN_VERSION/bin/mvn \
                -e -DPORTAL_HOME=$PORTAL_HOME \
                -Ppublic -DskipTests \
                -Dfinal.war.name=cbioportal \
                -Ddb.user=cbio_user \
                -Ddb.password=cbio_pass \
                -Ddb.portal_db_name=public_test \
                -Ddb.connection_string=jdbc:mysql://cbioportal-public.c1xhhbwn8izk.us-east-1.rds.amazonaws.com:3306/ \
                -Ddb.host=cbioportal-public.c1xhhbwn8izk.us-east-1.rds.amazonaws.com \
                clean install
        fi
    # spin up selenium docker grid
    - |
        if [[ "${TEST}" == end-to-end ]]
        then
            cd test/end-to-end && \
            docker-compose up -d && \
            sleep 30s && \
            cd ../.. && \
            # spot visual regression by comparing screenshots in the repo with
            # screenshots of this portal loaded with the data from the amazon db
            bash test/end-to-end/test_make_screenshots.sh test/end-to-end/screenshots.yml
        fi

notifications:
  slack: cbioportal:S2qVTFTFMtizONhCOe8BYxS6