README.md

Motion Correction

This package provides a Matlab implementation of the rigid motion correction algorithm, derived from the non-rigid motion correction [1].

Citation

If you find this package useful please cite the companion paper [1]:

@article{pnevmatikakis2017normcorre,
  title={NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data},
  author={Pnevmatikakis, Eftychios A and Giovannucci, Andrea},
  journal={Journal of neuroscience methods},
  volume={291},
  pages={83--94},
  year={2017},
  publisher={Elsevier}
}

References

[1] Eftychios A. Pnevmatikakis and Andrea Giovannucci, NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data, Journal of Neuroscience Methods, vol. 291, pp 83-94, 2017; doi: https://doi.org/10.1016/j.jneumeth.2017.07.031