-
Notifications
You must be signed in to change notification settings - Fork 4
/
main.py
310 lines (282 loc) · 14.7 KB
/
main.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
""" The main function of rPPG deep learning pipeline."""
import argparse
import random
import time
import numpy as np
import torch
from config import get_config
from dataset import data_loader
from neural_methods import trainer
from unsupervised_methods.unsupervised_predictor import unsupervised_predict
from torch.utils.data import DataLoader
import os
RANDOM_SEED = 100
torch.manual_seed(RANDOM_SEED)
torch.cuda.manual_seed(RANDOM_SEED)
torch.cuda.manual_seed_all(RANDOM_SEED)
np.random.seed(RANDOM_SEED)
random.seed(RANDOM_SEED)
torch.backends.cudnn.deterministic = True
torch.backends.cudnn.benchmark = False
# Create a general generator for use with the validation dataloader,
# the test dataloader, and the unsupervised dataloader
general_generator = torch.Generator()
general_generator.manual_seed(RANDOM_SEED)
# Create a training generator to isolate the train dataloader from
# other dataloaders and better control non-deterministic behavior
train_generator = torch.Generator()
train_generator.manual_seed(RANDOM_SEED)
def seed_worker(worker_id):
worker_seed = torch.initial_seed() % 2 ** 32
np.random.seed(worker_seed)
random.seed(worker_seed)
def add_args(parser):
"""Adds arguments for parser."""
parser.add_argument('--config_file', required=False,
default="configs/train_configs/PURE_PURE_UBFC_TSCAN_BASIC.yaml", type=str, help="The name of the model.")
return parser
def train_and_test(config, data_loader_dict):
"""Trains the model."""
if config.MODEL.NAME == "Physnet":
model_trainer = trainer.PhysnetTrainer.PhysnetTrainer(config, data_loader_dict)
elif config.MODEL.NAME == "Tscan":
model_trainer = trainer.TscanTrainer.TscanTrainer(config, data_loader_dict)
elif config.MODEL.NAME == "EfficientPhys":
model_trainer = trainer.EfficientPhysTrainer.EfficientPhysTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'DeepPhys':
model_trainer = trainer.DeepPhysTrainer.DeepPhysTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'BigSmall':
model_trainer = trainer.BigSmallTrainer.BigSmallTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'PhysFormer':
model_trainer = trainer.PhysFormerTrainer.PhysFormerTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'RhythmFormer':
model_trainer = trainer.RhythmFormerTrainer.RhythmFormerTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'RhythmMamba':
model_trainer = trainer.RhythmMambaTrainer.RhythmMambaTrainer(config, data_loader_dict)
else:
raise ValueError('Your Model is Not Supported Yet!')
model_trainer.train(data_loader_dict)
model_trainer.test(data_loader_dict)
def test(config, data_loader_dict):
"""Tests the model."""
if config.MODEL.NAME == "Physnet":
model_trainer = trainer.PhysnetTrainer.PhysnetTrainer(config, data_loader_dict)
elif config.MODEL.NAME == "Tscan":
model_trainer = trainer.TscanTrainer.TscanTrainer(config, data_loader_dict)
elif config.MODEL.NAME == "EfficientPhys":
model_trainer = trainer.EfficientPhysTrainer.EfficientPhysTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'DeepPhys':
model_trainer = trainer.DeepPhysTrainer.DeepPhysTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'BigSmall':
model_trainer = trainer.BigSmallTrainer.BigSmallTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'PhysFormer':
model_trainer = trainer.PhysFormerTrainer.PhysFormerTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'RhythmFormer':
model_trainer = trainer.RhythmFormerTrainer.RhythmFormerTrainer(config, data_loader_dict)
elif config.MODEL.NAME == 'RhythmMamba':
model_trainer = trainer.RhythmMambaTrainer.RhythmMambaTrainer(config, data_loader_dict)
else:
raise ValueError('Your Model is Not Supported Yet!')
model_trainer.test(data_loader_dict)
def unsupervised_method_inference(config, data_loader):
if not config.UNSUPERVISED.METHOD:
raise ValueError("Please set unsupervised method in yaml!")
for unsupervised_method in config.UNSUPERVISED.METHOD:
if unsupervised_method == "POS":
unsupervised_predict(config, data_loader, "POS")
elif unsupervised_method == "CHROM":
unsupervised_predict(config, data_loader, "CHROM")
elif unsupervised_method == "ICA":
unsupervised_predict(config, data_loader, "ICA")
elif unsupervised_method == "GREEN":
unsupervised_predict(config, data_loader, "GREEN")
elif unsupervised_method == "LGI":
unsupervised_predict(config, data_loader, "LGI")
elif unsupervised_method == "PBV":
unsupervised_predict(config, data_loader, "PBV")
else:
raise ValueError("Not supported unsupervised method!")
if __name__ == "__main__":
#os.environ["CUDA_VISIBLE_DEVICES"] = "0,1,2,3,4,5,6,7"
# parse arguments.
parser = argparse.ArgumentParser()
parser = add_args(parser)
parser = trainer.BaseTrainer.BaseTrainer.add_trainer_args(parser)
parser = data_loader.BaseLoader.BaseLoader.add_data_loader_args(parser)
args = parser.parse_args()
# configurations.
config = get_config(args)
print('Configuration:')
print(config, end='\n\n')
data_loader_dict = dict()
if config.TOOLBOX_MODE == "train_and_test":
# neural method dataloader
# train_loader
if config.TRAIN.DATA.DATASET == "COHFACE":
# train_loader = data_loader.COHFACELoader.COHFACELoader
raise ValueError("Unsupported dataset! Currently supporting UBFC, PURE, MMPD, and SCAMPS.")
elif config.TRAIN.DATA.DATASET == "UBFC":
train_loader = data_loader.UBFCrPPGLoader.UBFCrPPGLoader
elif config.TRAIN.DATA.DATASET == "PURE":
train_loader = data_loader.PURELoader.PURELoader
elif config.TRAIN.DATA.DATASET == "SCAMPS":
train_loader = data_loader.SCAMPSLoader.SCAMPSLoader
elif config.TRAIN.DATA.DATASET == "MMPD":
train_loader = data_loader.MMPDLoader.MMPDLoader
elif config.TRAIN.DATA.DATASET == "BP4DPlus":
train_loader = data_loader.BP4DPlusLoader.BP4DPlusLoader
elif config.TRAIN.DATA.DATASET == "BP4DPlusBigSmall":
train_loader = data_loader.BP4DPlusBigSmallLoader.BP4DPlusBigSmallLoader
elif config.TRAIN.DATA.DATASET == "UBFC-PHYS":
train_loader = data_loader.UBFCPHYSLoader.UBFCPHYSLoader
elif config.TRAIN.DATA.DATASET == "VIPL-HR":
train_loader = data_loader.VIPLHRLoader.VIPLHRLoader
else:
raise ValueError("Unsupported dataset! Currently supporting UBFC-rPPG, PURE, MMPD, \
SCAMPS, BP4D+ (Normal and BigSmall preprocessing), and UBFC-PHYS.")
# Create and initialize the train dataloader given the correct toolbox mode,
# a supported dataset name, and a valid dataset paths
if (config.TRAIN.DATA.DATASET and config.TRAIN.DATA.DATA_PATH):
train_data_loader = train_loader(
name="train",
data_path=config.TRAIN.DATA.DATA_PATH,
config_data=config.TRAIN.DATA)
data_loader_dict['train'] = DataLoader(
dataset=train_data_loader,
num_workers=16,
batch_size=config.TRAIN.BATCH_SIZE,
shuffle=True,
worker_init_fn=seed_worker,
generator=train_generator
)
else:
data_loader_dict['train'] = None
# valid_loader
if config.VALID.DATA.DATASET == "COHFACE":
# valid_loader = data_loader.COHFACELoader.COHFACELoader
raise ValueError("Unsupported dataset! Currently supporting UBFC, PURE, MMPD, and SCAMPS.")
elif config.VALID.DATA.DATASET == "UBFC":
valid_loader = data_loader.UBFCrPPGLoader.UBFCrPPGLoader
elif config.VALID.DATA.DATASET == "PURE":
valid_loader = data_loader.PURELoader.PURELoader
elif config.VALID.DATA.DATASET == "SCAMPS":
valid_loader = data_loader.SCAMPSLoader.SCAMPSLoader
elif config.VALID.DATA.DATASET == "MMPD":
valid_loader = data_loader.MMPDLoader.MMPDLoader
elif config.VALID.DATA.DATASET == "BP4DPlus":
valid_loader = data_loader.BP4DPlusLoader.BP4DPlusLoader
elif config.VALID.DATA.DATASET == "BP4DPlusBigSmall":
valid_loader = data_loader.BP4DPlusBigSmallLoader.BP4DPlusBigSmallLoader
elif config.VALID.DATA.DATASET == "UBFC-PHYS":
valid_loader = data_loader.UBFCPHYSLoader.UBFCPHYSLoader
elif config.VALID.DATA.DATASET == "VIPL-HR":
valid_loader = data_loader.VIPLHRLoader.VIPLHRLoader
elif config.VALID.DATA.DATASET is None and not config.TEST.USE_LAST_EPOCH:
raise ValueError("Validation dataset not specified despite USE_LAST_EPOCH set to False!")
else:
raise ValueError("Unsupported dataset! Currently supporting UBFC-rPPG, PURE, MMPD, \
SCAMPS, BP4D+ (Normal and BigSmall preprocessing), and UBFC-PHYS.")
# Create and initialize the valid dataloader given the correct toolbox mode,
# a supported dataset name, and a valid dataset path
if (config.VALID.DATA.DATASET and config.VALID.DATA.DATA_PATH and not config.TEST.USE_LAST_EPOCH):
valid_data = valid_loader(
name="valid",
data_path=config.VALID.DATA.DATA_PATH,
config_data=config.VALID.DATA)
data_loader_dict["valid"] = DataLoader(
dataset=valid_data,
num_workers=16,
batch_size=config.TRAIN.BATCH_SIZE, # batch size for val is the same as train
shuffle=False,
worker_init_fn=seed_worker,
generator=general_generator
)
else:
data_loader_dict['valid'] = None
if config.TOOLBOX_MODE == "train_and_test" or config.TOOLBOX_MODE == "only_test":
# test_loader
if config.TEST.DATA.DATASET == "COHFACE":
# test_loader = data_loader.COHFACELoader.COHFACELoader
raise ValueError("Unsupported dataset! Currently supporting UBFC, PURE, MMPD, and SCAMPS.")
elif config.TEST.DATA.DATASET == "UBFC":
test_loader = data_loader.UBFCrPPGLoader.UBFCrPPGLoader
elif config.TEST.DATA.DATASET == "PURE":
test_loader = data_loader.PURELoader.PURELoader
elif config.TEST.DATA.DATASET == "SCAMPS":
test_loader = data_loader.SCAMPSLoader.SCAMPSLoader
elif config.TEST.DATA.DATASET == "MMPD":
test_loader = data_loader.MMPDLoader.MMPDLoader
elif config.TEST.DATA.DATASET == "BP4DPlus":
test_loader = data_loader.BP4DPlusLoader.BP4DPlusLoader
elif config.TEST.DATA.DATASET == "BP4DPlusBigSmall":
test_loader = data_loader.BP4DPlusBigSmallLoader.BP4DPlusBigSmallLoader
elif config.TEST.DATA.DATASET == "UBFC-PHYS":
test_loader = data_loader.UBFCPHYSLoader.UBFCPHYSLoader
elif config.TEST.DATA.DATASET == "VIPL-HR":
test_loader = data_loader.VIPLHRLoader.VIPLHRLoader
else:
raise ValueError("Unsupported dataset! Currently supporting UBFC-rPPG, PURE, MMPD, \
SCAMPS, BP4D+ (Normal and BigSmall preprocessing), and UBFC-PHYS.")
if config.TOOLBOX_MODE == "train_and_test" and config.TEST.USE_LAST_EPOCH:
print("Testing uses last epoch, validation dataset is not required.", end='\n\n')
# Create and initialize the test dataloader given the correct toolbox mode,
# a supported dataset name, and a valid dataset path
if config.TEST.DATA.DATASET and config.TEST.DATA.DATA_PATH:
test_data = test_loader(
name="test",
data_path=config.TEST.DATA.DATA_PATH,
config_data=config.TEST.DATA)
data_loader_dict["test"] = DataLoader(
dataset=test_data,
num_workers=4,
batch_size=config.INFERENCE.BATCH_SIZE,
shuffle=False,
worker_init_fn=seed_worker,
generator=general_generator
)
else:
data_loader_dict['test'] = None
elif config.TOOLBOX_MODE == "unsupervised_method":
# unsupervised method dataloader
if config.UNSUPERVISED.DATA.DATASET == "COHFACE":
# unsupervised_loader = data_loader.COHFACELoader.COHFACELoader
raise ValueError("Unsupported dataset! Currently supporting UBFC, PURE, MMPD, and SCAMPS.")
elif config.UNSUPERVISED.DATA.DATASET == "UBFC":
unsupervised_loader = data_loader.UBFCrPPGLoader.UBFCrPPGLoader
elif config.UNSUPERVISED.DATA.DATASET == "PURE":
unsupervised_loader = data_loader.PURELoader.PURELoader
elif config.UNSUPERVISED.DATA.DATASET == "SCAMPS":
unsupervised_loader = data_loader.SCAMPSLoader.SCAMPSLoader
elif config.UNSUPERVISED.DATA.DATASET == "MMPD":
unsupervised_loader = data_loader.MMPDLoader.MMPDLoader
elif config.UNSUPERVISED.DATA.DATASET == "BP4DPlus":
unsupervised_loader = data_loader.BP4DPlusLoader.BP4DPlusLoader
elif config.UNSUPERVISED.DATA.DATASET == "UBFC-PHYS":
unsupervised_loader = data_loader.UBFCPHYSLoader.UBFCPHYSLoader
elif config.UNSUPERVISED.DATA.DATASET == "VIPL-HR":
unsupervised_loader = data_loader.VIPLHRLoader.VIPLHRLoader
else:
raise ValueError("Unsupported dataset! Currently supporting UBFC-rPPG, PURE, MMPD, \
SCAMPS, BP4D+, and UBFC-PHYS.")
unsupervised_data = unsupervised_loader(
name="unsupervised",
data_path=config.UNSUPERVISED.DATA.DATA_PATH,
config_data=config.UNSUPERVISED.DATA)
data_loader_dict["unsupervised"] = DataLoader(
dataset=unsupervised_data,
num_workers=16,
batch_size=1,
shuffle=False,
worker_init_fn=seed_worker,
generator=general_generator
)
else:
raise ValueError("Unsupported toolbox_mode! Currently support train_and_test or only_test or unsupervised_method.")
if config.TOOLBOX_MODE == "train_and_test":
train_and_test(config, data_loader_dict)
elif config.TOOLBOX_MODE == "only_test":
test(config, data_loader_dict)
elif config.TOOLBOX_MODE == "unsupervised_method":
unsupervised_method_inference(config, data_loader_dict)
else:
print("TOOLBOX_MODE only support train_and_test or only_test !", end='\n\n')