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@10XGenomics

10x Genomics

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  1. cellranger cellranger Public

    10x Genomics Single Cell Analysis

    Rust 373 94

  2. loupeR loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    R 106 15

  3. spaceranger spaceranger Public

    Rust

Repositories

Showing 10 of 71 repositories
  • enclone Public archive

    VDJ Clonotyping & Analysis Tools

    10XGenomics/enclone’s past year of commit activity
    Rust 48 14 4 0 Updated Dec 17, 2024
  • orbit Public

    Rust wrapper for STAR aligner

    10XGenomics/orbit’s past year of commit activity
    C 15 MIT 2 0 5 Updated Dec 16, 2024
  • loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    10XGenomics/loupeR’s past year of commit activity
    R 106 15 1 0 Updated Dec 12, 2024
  • cellranger Public

    10x Genomics Single Cell Analysis

    10XGenomics/cellranger’s past year of commit activity
    Rust 373 94 0 0 Updated Dec 11, 2024
  • rules_conda Public

    Bazel rules for creating conda environments

    10XGenomics/rules_conda’s past year of commit activity
    Go 5 MIT 1 3 1 Updated Dec 9, 2024
  • spaceranger Public
    10XGenomics/spaceranger’s past year of commit activity
    Rust 0 0 0 0 Updated Dec 6, 2024
  • fastq_set Public archive

    Tools for working FASTQ files from sequencers (R1/R2/I1/I2)

    10XGenomics/fastq_set’s past year of commit activity
    Rust 13 3 0 0 Updated Dec 6, 2024
  • HumanColonCancer_VisiumHD Public

    Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling"

    10XGenomics/HumanColonCancer_VisiumHD’s past year of commit activity
    R 40 3 0 1 Updated Dec 5, 2024
  • analysis_guides Public

    10x Genomics analysis guides files

    10XGenomics/analysis_guides’s past year of commit activity
    Jupyter Notebook 7 10 1 0 Updated Dec 3, 2024
  • scan-rs Public

    Single-cell analysis methods in Rust

    10XGenomics/scan-rs’s past year of commit activity
    Rust 15 1 1 1 Updated Nov 26, 2024
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