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using scHLA-count for 3' 10x scRNA-seq data #27

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adhisadi opened this issue Oct 17, 2024 · 0 comments
Open

using scHLA-count for 3' 10x scRNA-seq data #27

adhisadi opened this issue Oct 17, 2024 · 0 comments

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@adhisadi
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Hi,
Do you recommend to use scHLAcount for 3' data (at all)? Reading the documentation, I get the idea but I was wondering if anything has been done about "the future work: Improve genotyping algorithm, especially on 3' GEX"
If no, are there any tools I could use?

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