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CMakeLists.txt: modify to work with ACCESS-NRI's FMS fork
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@harshula
harshula committed Dec 3, 2024
1 parent 2ea4535 commit 0b54f21
Showing 1 changed file with 84 additions and 125 deletions.
209 changes: 84 additions & 125 deletions CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -19,13 +19,18 @@

# Copyright (c) GFDL, @underwoo

cmake_minimum_required(VERSION 3.12 FATAL_ERROR)
# https://cmake.org/cmake/help/v3.6/module/FindPkgConfig.html
# 3.11: add_library() doesn't require dummy source
# 3.12: target_link_libraries() supports OBJECT targets
# 3.20: cmake_path()
cmake_minimum_required(VERSION 3.20)

# Define the CMake project
project(FMS
VERSION 2024.03.0
DESCRIPTION "GFDL FMS Library"
HOMEPAGE_URL "https://www.gfdl.noaa.gov/fms"
VERSION 2020.03.1
# Forked in 2020 at: https://github.com/ACCESS-NRI/FMS/commit/e8940fe90d68c3dc7c0d6bf1b8f552a577251754
DESCRIPTION "ACCESS-NRI fork of GFDL FMS Library"
HOMEPAGE_URL "https://github.com/ACCESS-NRI/FMS/"
LANGUAGES C Fortran)

include(GNUInstallDirs)
Expand Down Expand Up @@ -53,22 +58,26 @@ endif()
################################################################################

if(CMAKE_Fortran_COMPILER_ID MATCHES "GNU")

# Precision-based Fortran compiler flags
set(r8_flags "-fdefault-real-8 -fdefault-double-8") # Fortran flags for 64BIT precision
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -fcray-pointer -fconvert=big-endian -ffree-line-length-none -fno-range-check -fbacktrace")
set(CMAKE_Fortran_FLAGS_RELEASE "-O3 -funroll-all-loops -finline-functions")
set(CMAKE_Fortran_FLAGS_DEBUG "-O0 -g -fcheck=bounds -ffpe-trap=invalid,zero,overflow,underflow" )
set(CMAKE_Fortran_LINK_FLAGS "" )

# Copied from MOM5/bin/mkmf.template.nci.gfortran
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -fcray-pointer -fdefault-real-8 -ffree-line-length-none -fno-range-check -Waliasing -Wampersand -Warray-bounds -Wcharacter-truncation -Wconversion -Wline-truncation -Wintrinsics-std -Wsurprising -Wno-tabs -Wunderflow -Wunused-parameter -Wintrinsic-shadow -Wno-align-commons")
set(CMAKE_Fortran_FLAGS_RELEASE "-O2")
set(CMAKE_Fortran_FLAGS_DEBUG "-O0 -g -W -fbounds-check")

elseif(CMAKE_Fortran_COMPILER_ID STREQUAL "Intel")

# Precision-based Fortran compiler flags
set(r4_flags "-real-size 32") # Fortran flags for 32BIT precision
set(r8_flags "-real-size 64") # Fortran flags for 64BIT precision
set(r8_flags "${r8_flags} -no-prec-div -no-prec-sqrt")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -fpp -fno-alias -auto -safe-cray-ptr -ftz -assume byterecl -align array64byte -nowarn -sox -traceback")
set(CMAKE_Fortran_FLAGS_RELEASE "-O2 -debug minimal -fp-model source -nowarn -qoverride-limits -qno-opt-dynamic-align -qopt-prefetch=3")
set(CMAKE_Fortran_FLAGS_DEBUG "-g -O0 -check -check noarg_temp_created -check nopointer -warn -warn noerrors -fpe0 -ftrapuv")
set(CMAKE_Fortran_LINK_FLAGS "")

# Copied from MOM5/bin/mkmf.template.nci
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all")
set(CMAKE_Fortran_FLAGS_RELEASE "-g3 -O2 -xCORE-AVX2 -debug all -check none")
set(CMAKE_Fortran_FLAGS_DEBUG "-g3 -O0 -debug all -check -check noarg_temp_created -check nopointer -warn -warn noerrors -ftrapuv")

elseif(CMAKE_Fortran_COMPILER_ID STREQUAL "IntelLLVM")
message(FATAL_ERROR "Fortran compiler ${CMAKE_Fortran_COMPILER_ID} is unsupported")
Expand All @@ -83,17 +92,17 @@ endif()

if(CMAKE_C_COMPILER_ID MATCHES "GNU")

# GNU C
set(CMAKE_C_FLAGS_RELEASE "-O3")
set(CMAKE_C_FLAGS_DEBUG "-O0 -g")
set(CMAKE_C_LINK_FLAGS "")
# Copied from MOM5/bin/mkmf.template.nci.gfortran
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS}")
set(CMAKE_C_FLAGS_DEBUG "-O0 -g")
set(CMAKE_C_FLAGS_RELEASE "-O2")

elseif(CMAKE_C_COMPILER_ID STREQUAL "Intel")
# Intel C
set( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -sox -traceback")
set( CMAKE_C_FLAGS_RELEASE "-qno-opt-dynamic-align -O2 -debug minimal -fp-model source")
set( CMAKE_C_FLAGS_DEBUG "-O0 -g -ftrapuv")
set( CMAKE_C_LINK_FLAGS "")

# Copied from MOM5/bin/mkmf.template.nci
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS}")
set(CMAKE_C_FLAGS_DEBUG "-O0 -g -ftrapuv -traceback")
set(CMAKE_C_FLAGS_RELEASE "-O2 -debug minimal -xCORE-AVX2")

elseif(CMAKE_C_COMPILER_ID STREQUAL "IntelLLVM")
message(FATAL_ERROR "C compiler ${CMAKE_C_COMPILER_ID} is unsupported")
Expand All @@ -109,18 +118,29 @@ endif()

# Build options
option(OPENMP "Build FMS with OpenMP support" OFF)
option(32BIT "Build 32-bit (r4) FMS library" ON)
option(64BIT "Build 64-bit (r8) FMS library" OFF)
# TODO: Should this be removed?
option(32BIT "Build 32-bit (r4) FMS library" OFF)

# TODO: Should this be removed?
# ACCESS-NRI's MOM5 uses -r8:
# $ grep FFLAGS bin/mkmf.template.nci | grep r8
# FFLAGS := -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all
option(64BIT "Build 64-bit (r8) FMS library" ON)

# TODO: Remove:
option(FPIC "Build with position independent code" OFF)
option(SHARED_LIBS "Build shared/dynamic libraries" OFF)

# Options for compiler definitions
option(INTERNAL_FILE_NML "Enable compiler definition -DINTERNAL_FILE_NML" ON)
# TODO: Remove:
option(ENABLE_QUAD_PRECISION "Enable compiler definition -DENABLE_QUAD_PRECISION" ON)
option(PORTABLE_KINDS "Enable compiler definition -DPORTABLE_KINDS" OFF)
option(GFS_PHYS "Enable compiler definition -DGFS_PHYS" OFF)
option(LARGEFILE "Enable compiler definition -Duse_LARGEFILE" OFF)
# TODO: Remove:
option(WITH_YAML "Enable compiler definition -Duse_yaml" OFF)
# TODO: Remove:
option(USE_DEPRECATED_IO "Enable compiler definition -Duse_deprecated_io (compile with fms_io/mpp_io)" OFF)

if(32BIT)
Expand Down Expand Up @@ -156,44 +176,23 @@ endif ()

# Collect FMS Fortran source files
list(APPEND fms_fortran_src_files
affinity/fms_affinity.F90
amip_interp/amip_interp.F90
astronomy/astronomy.F90
axis_utils/axis_utils.F90
axis_utils/axis_utils2.F90
block_control/block_control.F90
column_diagnostics/column_diagnostics.F90
constants/constants.F90
constants/fmsconstants.F90
constants4/constantsr4.F90
constants4/fmsconstantsr4.F90
coupler/atmos_ocean_fluxes.F90
coupler/coupler_types.F90
coupler/ensemble_manager.F90
data_override/get_grid_version.F90
data_override/data_override.F90
diag_integral/diag_integral.F90
diag_manager/diag_axis.F90
diag_manager/diag_data.F90
diag_manager/diag_grid.F90
diag_manager/diag_manager.F90
diag_manager/diag_manifest.F90
diag_manager/diag_output.F90
diag_manager/diag_table.F90
diag_manager/diag_util.F90
diag_manager/fms_diag_time_utils.F90
diag_manager/fms_diag_object.F90
diag_manager/fms_diag_yaml.F90
diag_manager/fms_diag_file_object.F90
diag_manager/fms_diag_field_object.F90
diag_manager/fms_diag_axis_object.F90
diag_manager/fms_diag_output_buffer.F90
diag_manager/fms_diag_input_buffer.F90
diag_manager/fms_diag_time_reduction.F90
diag_manager/fms_diag_outfield.F90
diag_manager/fms_diag_elem_weight_procs.F90
diag_manager/fms_diag_fieldbuff_update.F90
diag_manager/fms_diag_bbox.F90
diag_manager/fms_diag_reduction_methods.F90
drifters/cloud_interpolator.F90
drifters/drifters.F90
drifters/drifters_comm.F90
Expand All @@ -203,73 +202,70 @@ list(APPEND fms_fortran_src_files
drifters/quicksort.F90
exchange/stock_constants.F90
exchange/xgrid.F90
fft/fft99.F90
fft/fft.F90
fms/fms.F90
fms/fms_io.F90
field_manager/field_manager.F90
field_manager/fm_util.F90
field_manager/fm_yaml.F90
fms/fms_io.F90
fms/fms.F90
fms2_io/blackboxio.F90
fms2_io/fms_io_utils.F90
fms2_io/fms_netcdf_domain_io.F90
fms2_io/fms_netcdf_unstructured_domain_io.F90
fms2_io/fms2_io.F90
fms2_io/netcdf_io.F90
field_manager/parse.inc
horiz_interp/horiz_interp_bicubic.F90
horiz_interp/horiz_interp_bilinear.F90
horiz_interp/horiz_interp_conserve.F90
horiz_interp/horiz_interp.F90
horiz_interp/horiz_interp_spherical.F90
horiz_interp/horiz_interp_type.F90
horiz_interp/horiz_interp.F90
interpolator/interpolator.F90
horiz_interp/test_horiz_interp.F90
memutils/memutils.F90
monin_obukhov/monin_obukhov_inter.F90
monin_obukhov/monin_obukhov.F90
mosaic/gradient.F90
mosaic/grid.F90
mosaic/mosaic.F90
mosaic2/grid2.F90
mosaic2/mosaic2.F90
mpp/mpp.F90
mpp/mpp_data.F90
mpp/mpp_domains.F90
mpp/mpp_efp.F90
mpp/mpp.F90
mpp/mpp_io.F90
mpp/mpp_memutils.F90
mpp/mpp_parameter.F90
mpp/mpp_pset.F90
mpp/mpp_utilities.F90
parser/yaml_parser.F90
parser/fms_yaml_output.F90
oda_tools/oda_core_ecda.F90
oda_tools/oda_core.F90
oda_tools/oda_types.F90
oda_tools/write_ocean_data.F90
oda_tools/xbt_drop_rate_adjust.f90
platform/platform.F90
random_numbers/mersennetwister.F90
random_numbers/MersenneTwister.F90
random_numbers/random_numbers.F90
sat_vapor_pres/sat_vapor_pres_k.F90
sat_vapor_pres/sat_vapor_pres.F90
string_utils/fms_string_utils.F90
sat_vapor_pres/sat_vapor_pres_k.F90
station_data/station_data.F90
time_interp/time_interp_external.F90
time_interp/time_interp_external2.F90
time_interp/time_interp.F90
time_manager/get_cal_time.F90
time_manager/time_manager.F90
topography/gaussian_topog.F90
topography/topography.F90
tracer_manager/tracer_manager.F90
tridiagonal/tridiagonal.F90
libFMS.F90
)

# Collect FMS C source files
# mosaic/create_xgrid.h
# mosaic/gradient_c2l.h
# mosaic/interp.h
# mosaic/mosaic_util.h
# mosaic/read_mosaic.h
list(APPEND fms_c_src_files
affinity/affinity.c
fms/fms_stacksize.c
memutils/memuse.c
mosaic/create_xgrid.c
mosaic/gradient_c2l.c
mosaic/interp.c
mosaic/mosaic_util.c
mosaic/read_mosaic.c
mpp/mpp_memuse.c
parser/yaml_parser_binding.c
parser/yaml_output_functions.c
string_utils/fms_string_utils_binding.c
mpp/affinity.c
mpp/nsclock.c
mpp/threadloc.c
)

# Collect FMS header files
Expand All @@ -281,7 +277,9 @@ list(APPEND fms_header_files
# Standard FMS compiler definitions
list(APPEND fms_defs
use_libMPI
use_netCDF)
use_netCDF
SPMD
__IFC)

# check gettid
include(CheckFunctionExists)
Expand All @@ -291,6 +289,7 @@ if(HAVE_GETTID)
endif()

# Additional (optional) compiler definitions
# TODO: Remove:
if(NOT CONSTANTS)
set(CONSTANTS GFDL)
endif()
Expand Down Expand Up @@ -353,7 +352,12 @@ foreach(kind ${kinds})
# C
add_library(${libTgt}_c OBJECT ${fms_c_src_files})

target_include_directories(${libTgt}_c PRIVATE include)
target_include_directories(${libTgt}_c PRIVATE include
mosaic
drifters
fms
mpp/include)

target_compile_definitions(${libTgt}_c PRIVATE "${fms_defs}")

target_link_libraries(${libTgt}_c PRIVATE NetCDF::NetCDF_C
Expand All @@ -367,32 +371,10 @@ foreach(kind ${kinds})
add_library(${libTgt}_f OBJECT ${fms_fortran_src_files})

target_include_directories(${libTgt}_f PRIVATE include
mosaic
drifters
fms
fms/include
fms2_io/include
string_utils/include
mpp/include
column_diagnostics/include
monin_obukhov/include
sat_vapor_pres/include
horiz_interp/include
diag_integral/include
random_numbers/include
diag_manager/include
constants4
topography/include
axis_utils/include
mosaic2/include
constants
astronomy/include
field_manager/include
time_interp/include
tracer_manager/include
tridiagonal/include
interpolator/include
coupler/include
data_override/include
amip_interp/include)
mpp/include)

target_compile_definitions(${libTgt}_f PRIVATE "${fms_defs}")
target_compile_definitions(${libTgt}_f PRIVATE "${${kind}_defs}")
Expand Down Expand Up @@ -433,30 +415,7 @@ foreach(kind ${kinds})

target_include_directories(${libTgt} PUBLIC
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/fms>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/fms/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/fms2_io/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/column_diagnostics/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/astronomy/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/monin_obukhov/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/sat_vapor_pres/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/field_manager/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/horiz_interp/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/mosaic2/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/string_utils/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/mpp/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/diag_manager/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/topography/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/random_numbers/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/diag_integral/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/diag_manager/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/tracer_manager/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/interpolator/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/coupler/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/mosaic2/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/data_override/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/tridiagonal/include>
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/amip_interp/include>)
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/mpp/include>)

target_include_directories(${libTgt} INTERFACE
$<BUILD_INTERFACE:${moduleDir}>
Expand Down

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