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submission

Utilities to upload metadata and files to ACED's Gen3 instance

Setup

python3 -m venv venv
source venv/bin/activate
pip install -r requirements.txt
pip install -e . 

Use

see etl pod

Distribution

  • PyPi
# update pypi

# pypi credentials - see https://twine.readthedocs.io/en/stable/#environment-variables

export TWINE_USERNAME=  #  the username to use for authentication to the repository.
export TWINE_PASSWORD=  # the password to use for authentication to the repository.

# this could be maintained as so: export $(cat .env | xargs)

rm -r dist/
python3  setup.py sdist bdist_wheel
twine upload dist/*

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Submit FHIR based data into a Gen3 Commons

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