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Reporting Bulk-RNAseq Data Analysis

  1. Install Miniconda and create an environment for Snakemake

    bash _setup_miniconda.sh

    The script will check if you already have Miniconda installed.

  2. Ejecute the Snakeme workflow, check the $SMK_FILE path according your own folder structure

    bash analysis/_run_snakemake.sh

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