Initiate module for consensus cell typing

[allyhawkins]

Purpose/implementation Section

Please link to the GitHub issue that this pull request addresses.

Closes #886

What is the goal of this pull request?

Here I am just initiating the module to be used for exploring the creation of consensus cell type labels.

Briefly describe the general approach you took to achieve this goal.

I ran the ./create-analysis-module.py script with the --use-renv flag. I am not totally sure if I'm going to use R and Python but I was pretty confident I would have at least R so am starting there.

I named this module cell-type-consensus and followed the same format we've been using for naming other cell type modules. Let me know if you prefer a different name.

The last thing I did was update the README briefly by adding a very brief summary of what is included in this module and then TBD for the other sections. I plan on updating this as we add to the module but thought this was sufficient for now.

If known, do you anticipate filing additional pull requests to complete this analysis module?

Absolutely. Next up I'll be creating a table with cell ontology IDs for cell types in the CellAssign reference.

Author checklists

Analysis module and review

• This analysis module uses the analysis template and has the expected directory structure.
• The analysis module README.md has been updated to reflect code changes in this pull request.
• The analytical code is documented and contains comments.
• Any results and/or plots this code produces have been added to your S3 bucket for review.

Reproducibility checklist

• Code in this pull request has been added to the GitHub Action workflow that runs this module.
• The dependencies required to run the code in this pull request have been added to the analysis module Dockerfile.
• If applicable, the dependencies required to run the code in this pull request have been added to the analysis module conda environment.yml file.
• If applicable, R package dependencies required to run the code in this pull request have been added to the analysis module renv.lock file.

[jaclyn-taroni]

Naming and description LGTM 👍🏻

But I'd probably take out the notebook template before merging (somewhat a personal preference)

[jaclyn-taroni]

You can probably remove this!