LBN: Fix typos in description of labnotebook entries

Author: MichaelHuth

Packages/MIES/labnotebook_numerical_description.itx

@@ -6,16 +6,16 @@ BEGIN
 	"TimeStamp"	"s"	"-"	"Time Stamp: Seconds since Igor epoch (1/1/1904) in local time zone with millisecond precision. Written at time of labnotebook entry."	"ALL"	""
 	"TimeStampSinceIgorEpochUTC"	"s"	"-"	"Time Stamp: Seconds since Igor epoch (1/1/1904) in coordinated universal time zone (UTC) with millisecond precision. Written at time of labnotebook entry."	"ALL"	""
 	"EntrySourceType"	""	"-"	"Entry source type: type of the labnotebook entry, 0 for data acquisition, 1 for test pulse, NaN for all other types including user entries.\r"	"ALL"	""
-	"AcquisitionState"	""	"-"	"Stores the current numbered state of data acquistion."	"ALL"	""
+	"AcquisitionState"	""	"-"	"Stores the current numbered state of data acquisition."	"ALL"	""
 	"TP Baseline Vm"	"mV"	"1"	"Testpulse Baseline: Average membrane potential, see https://alleninstitute.github.io/MIES/CalculateTPLikePropsFromSweep.html"	"DEPEND"	"IC;I=0"
 	"TP Baseline pA"	"pA"	"50"	"Testpulse Baseline: Average holding current, see https://alleninstitute.github.io/MIES/CalculateTPLikePropsFromSweep.html"	"DEPEND"	"VC"
-	"TP Peak Resistance"	"MΩ"	"runtime"	"Testpulse Peak Resistance: Instantaneous resistance measurement calculated from testpulse profil, https://alleninstitute.github.io/MIES/CalculateTPLikePropsFromSweep.html"	"DEPEND"	""
+	"TP Peak Resistance"	"MΩ"	"runtime"	"Testpulse Peak Resistance: Instantaneous resistance measurement calculated from testpulse profile, https://alleninstitute.github.io/MIES/CalculateTPLikePropsFromSweep.html"	"DEPEND"	""
 	"TP Steady State Resistance"	"MΩ"	"runtime"	"Testpulse Steady State Resistance: Resistance measurement obtained from the end of the applied testpulse profile, see https://alleninstitute.github.io/MIES/CalculateTPLikePropsFromSweep.html"	"DEPEND"	""
-	"Fast compensation capacitance"	"F"	"1e-12"	"Fast capacitance compensation: Cp Fast sets the parameters of current injected into the headstage atvoltage steps to charge (and discharge) the fast component of electrodecapacitance. The adjustable fields display estimates of the magnitudeand time constant for this capacitance.\r\rFor theoretical details see the MultiClamp700B Manual."	"DEPEND"	""
-	"Slow compensation capacitance"	"F"	"1e-12"	"Slow capacitance compensation: Settings for Cp Slow determine the parameters of current injected intothe headstage at voltage steps to charge and discharge the slow componentof electrode capacitance. The adjustable fields display estimates of themagnitude and time constant for this capacitance.\r\rFor theoretical details see the MultiClamp700B Manual."	"DEPEND"	""
+	"Fast compensation capacitance"	"F"	"1e-12"	"Fast capacitance compensation: Cp Fast sets the parameters of current injected into the headstage at voltage steps to charge (and discharge) the fast component of electrode capacitance. The adjustable fields display estimates of the magnitudeand time constant for this capacitance.\r\rFor theoretical details see the MultiClamp700B Manual."	"DEPEND"	""
+	"Slow compensation capacitance"	"F"	"1e-12"	"Slow capacitance compensation: Settings for Cp Slow determine the parameters of current injected into the headstage at voltage steps to charge and discharge the slow component of electrode capacitance. The adjustable fields display estimates of themagnitude and time constant for this capacitance.\r\rFor theoretical details see the MultiClamp700B Manual."	"DEPEND"	""
 	"Fast compensation time"	"s"	"1e-6"	"Fast compensation time: Time constant for Fast compensation\r\rFor theoretical details see the MultiClamp700B Manual."	"DEPEND"	""
 	"Slow compensation time"	"s"	"1e-6"	"Slow compensation time: Time constant for slow compensation\r\rFor theoretical details see the MultiClamp700B Manual."	"DEPEND"	""
-	"Headstage Active"	"On/Off"	"-"	"Headtage Active State: Specifies if the hardware associated with the headstage is in use."	"DEPEND"	""
+	"Headstage Active"	"On/Off"	"-"	"Headstage Active State: Specifies if the hardware associated with the headstage is in use."	"DEPEND"	""
 	"DAC"	""	"0.1"	"Digital Analog Channel used for testpulse or data acquisition"	"ALL"	""
 	"ADC"	""	"0.1"	"Analog digital channel used for testpulse or data acquisition"	"ALL"	""
 	"Clamp Mode"	""	"-"	"Amplifier clamp state: One of 0 (VC aka Voltage Clamp), 1 (IC aka Current Clamp), 2 (I=0 aka I Equal Zero)"	"ALL"	""
@@ -29,32 +29,32 @@ BEGIN
 	"Set Sweep Count"	""	"0.1"	"Non-negative sweep (timeseries)  index for the stimulus set."	"ALL"	""
 	"TP Insert Checkbox"	"On/Off"	"-"	"Inserted Testpulse:"	"INDEP"	""
 	"Inter-trial interval"	"s"	"0.01"	"Target interval for consecutive sweeps, start to start, in seconds"	"INDEP"	""
-	"Inter-trial interval (effective)"	"s"	"-"	"Realised interval for consecutive sweeps, start to start, in seconds including repurposed time"	"INDEP"	""
+	"Inter-trial interval (effective)"	"s"	"-"	"Realized interval for consecutive sweeps, start to start, in seconds including repurposed time"	"INDEP"	""
 	"TTL rack zero bits"	"bit mask"	"-"	"ITC hardware specific: Bit mask for active DAEphys TTL channels of rack zero.\r\rSee also https://alleninstitute.github.io/MIES/file/_m_i_e_s___mies_utilities_8ipf.html?highlight=getttlbits#_CPPv310GetTTLBits4wave8variable8variable and https://alleninstitute.github.io/MIES/file/_m_i_e_s___mies_utilities_8ipf.html?highlight=getttlstimsets#_CPPv314GetTTLStimSets4wave4wave8variable."	"INDEP"	""
 	"TTL rack one bits"	"bit mask"	"-"	"ITC hardware specific: Bit mask for active DAEphys TTL channels of rack one.\r\rSee also https://alleninstitute.github.io/MIES/file/_m_i_e_s___mies_utilities_8ipf.html?highlight=getttlbits#_CPPv310GetTTLBits4wave8variable8variable and https://alleninstitute.github.io/MIES/file/_m_i_e_s___mies_utilities_8ipf.html?highlight=getttlstimsets#_CPPv314GetTTLStimSets4wave4wave8variable."	"INDEP"	""
 	"TTL rack zero channel"	""	"-"	"ITC hardware specific: ITC XOP TTL hardware channel for rack zero, e.g., ITC 1600 = 0, ITC 18USB = 1"	"INDEP"	""
 	"TTL rack one channel"	""	"-"	"ITC hardware specific: ITC XOP TTL hardware channel for rack one, e.g., ITC 1600 = 3. Of the ITC devices, only the ITC1600 can have up to two racks."	"INDEP"	""
-	"Delay onset user"	"ms"	"1"	"User defined delay of stimset onset in milliseconds across all active channels. Occurs immediately after an optionally inserted Testpulse. Output is constant zero during the delay.\r\rSee https://alleninstitute.github.io/MIES/#id2 for a visualization of the sweep delays during data acquisition."	"INDEP"	""
-	"Delay onset auto"	"ms"	"1"	"Automatically defined delay in milliseconds due to the Testpulse (optionally) inserted at sweep onset.\r\rSee https://alleninstitute.github.io/MIES/#id2 for a visualization of the sweep delays during data acquisition."	"INDEP"	""
+	"Delay onset user"	"ms"	"1"	"User defined delay of stimset onset in milliseconds across all active channels. Occurs immediately after an optionally inserted testpulse. Output is constant zero during the delay.\r\rSee https://alleninstitute.github.io/MIES/#id2 for a visualization of the sweep delays during data acquisition."	"INDEP"	""
+	"Delay onset auto"	"ms"	"1"	"Automatically defined delay in milliseconds due to the testpulse (optionally) inserted at sweep onset.\r\rSee https://alleninstitute.github.io/MIES/#id2 for a visualization of the sweep delays during data acquisition."	"INDEP"	""
 	"Delay termination"	"ms"	"1"	"User defined delay of sweep termination in milliseconds across all active channels. Occurs immediately after stimulus set termination. Output is constant zero during the delay.\r\rSee https://alleninstitute.github.io/MIES/#id2 for a visualization of the sweep delays during data acquisition."	"INDEP"	""
 	"Delay distributed DAQ"	"ms"	"1"	"Distributed data acquisition distributes in time the selected stimsets across all active channels in a single sweep. The delay is the time in milliseconds between stimsets on each active channel.\r\rSee https://alleninstitute.github.io/MIES/index.html#id3 for visualization of the delay."	"INDEP"	""
 	"Distributed DAQ"	"On/Off"	"-"	"Distributed data acquisition distributes in time the selected stimsets across all active channels in a single sweep.\r\rSee https://alleninstitute.github.io/MIES/index.html#id3 for visualization of the delay."	"INDEP"	""
-	"Repeat Sets"	""	"1"	"User defined value that sets the minimum number of times a stimulus set is acquired within a repeated acquisition cycle.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualisation of set repetition and indexing."	"INDEP"	""
-	"Scaling zero"	"On/Off"	"-"	"The DA scaling for active channels is set to zero after the stimulus set has cycled once. Only applies with locked indexing.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualisation of scaling to zero."	"INDEP"	""
-	"Indexing"	"On/Off"	"-"	"Enables the acquistion of multiple stimulus sets, for an active channel, on a single repeated acquisition cycle.\r\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualisation of indexing."	"INDEP"	""
-	"Locked indexing"	"On/Off"	"-"	"Enables the acquistion of multiple stimulus sets, for an active channel, on a single repeated acquisition cycle.\rA special form of  indexing where the transition to the next stimulus set happens on the same sweep for all active channels.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualisation of indexing."	"INDEP"	""
-	"Repeated Acquisition"	"On/Off"	"-"	"Automated acquisition of more than one sweep.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualisation of repeated acquisition."	"INDEP"	""
-	"Random Repeated Acquisition"	"On/Off"	"-"	"Randomizes the sweep acquisition order within a stimulus set.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualisation of indexing."	"INDEP"	""
+	"Repeat Sets"	""	"1"	"User defined value that sets the minimum number of times a stimulus set is acquired within a repeated acquisition cycle.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualization of set repetition and indexing."	"INDEP"	""
+	"Scaling zero"	"On/Off"	"-"	"The DA scaling for active channels is set to zero after the stimulus set has cycled once. Only applies with locked indexing.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualization of scaling to zero."	"INDEP"	""
+	"Indexing"	"On/Off"	"-"	"Enables the acquisition of multiple stimulus sets, for an active channel, on a single repeated acquisition cycle.\r\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualization of indexing."	"INDEP"	""
+	"Locked indexing"	"On/Off"	"-"	"Enables the acquisition of multiple stimulus sets, for an active channel, on a single repeated acquisition cycle.\rA special form of  indexing where the transition to the next stimulus set happens on the same sweep for all active channels.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualisation of indexing."	"INDEP"	""
+	"Repeated Acquisition"	"On/Off"	"-"	"Automated acquisition of more than one sweep.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualization of repeated acquisition."	"INDEP"	""
+	"Random Repeated Acquisition"	"On/Off"	"-"	"Randomizes the sweep acquisition order within a stimulus set.\r\rSee https://alleninstitute.github.io/MIES/index.html#id1 for a visualization of indexing."	"INDEP"	""
 	"Sampling interval DA"	"ms"	"1"	"Time interval between consecutive DA data points."	"INDEP"	""
 	"Sampling interval AD"	"ms"	"1"	"Time interval between consecutive AD data points."	"INDEP"	""
 	"Sampling interval TTL"	"ms"	"1"	"Time interval between consecutive TTL data points."	"INDEP"	""
 	"Sampling interval multiplier"	""	"0.1"	"The hardware limited minimum interval between consecutive data points is called the minimum sampling interval.\rThis interval can be prolonged by the user configured sampling interval multiplier."	"INDEP"	""
 	"Stim set length"	""	"0.1"	"Number of points in each sweep of the stimulus set. This is determined by the acquisition sampling interval."	"ALL"	""
-	"oodDAQ Pre Feature"	"ms"	"1"	"oodDAQ pre delay is the leading time envelope for non-zero parts of the stimulus set sweeps.\r\rSee https://alleninstitute.github.io/MIES/#id4 for a visualisation of oodDAQ."	"INDEP"	""
-	"oodDAQ Post Feature"	"ms"	"1"	"oodDAQ post delay is the trailing time envelope for non-zero parts of the stimulus set sweeps.\r\rSee https://alleninstitute.github.io/MIES/#id4 for a visualisation of oodDAQ."	"INDEP"	""
-	"oodDAQ Resolution"	"ms"	"1"	"The minimum search step for the oodDAQ time offset calculation.\r\rSee https://alleninstitute.github.io/MIES/#id4 for a visualisation of oodDAQ."	"INDEP"	""
+	"oodDAQ Pre Feature"	"ms"	"1"	"oodDAQ pre delay is the leading time envelope for non-zero parts of the stimulus set sweeps.\r\rSee https://alleninstitute.github.io/MIES/#id4 for a visualization of oodDAQ."	"INDEP"	""
+	"oodDAQ Post Feature"	"ms"	"1"	"oodDAQ post delay is the trailing time envelope for non-zero parts of the stimulus set sweeps.\r\rSee https://alleninstitute.github.io/MIES/#id4 for a visualization of oodDAQ."	"INDEP"	""
+	"oodDAQ Resolution"	"ms"	"1"	"The minimum search step for the oodDAQ time offset calculation.\r\rSee https://alleninstitute.github.io/MIES/#id4 for a visualization of oodDAQ."	"INDEP"	""
 	"Optimized Overlap dDAQ"	"On/Off"	"-"	"Optimized overlap distributed data acquisition (oodDAQ) offsets in time stimulus set sweeps across headstages. The offset is determined such that the non-zero parts, plus user defined envelope (pre and post delay),  of the stimset sweeps don't overlap on different headstages.\r\rSee https://alleninstitute.github.io/MIES/#id4 for a visualisation of oodDAQ."	"INDEP"	""
-	"Delay onset oodDAQ"	"ms"	"1"	"Calculated total oodDAQ offset used for acquisition.\r\rSee https://alleninstitute.github.io/MIES/#id4 for a visualisation of oodDAQ."	"DEPEND"	""
+	"Delay onset oodDAQ"	"ms"	"1"	"Calculated total oodDAQ offset used for acquisition.\r\rSee https://alleninstitute.github.io/MIES/#id4 for a visualization of oodDAQ."	"DEPEND"	""
 	"Pulse To Pulse Length"	"ms"	"1"	"Not used in newer MIES versions."	"ALL"	""
 	"Repeated Acq Cycle ID"	""	"1"	"The \"Repeated Acq Cycle ID\" labels each repeated acquisition with a unique integer number.\rSweeps belonging to the same repeated acquisition cycle have the same ID.\rFor yoked devices the follower and lead devices will have the same ID,\rwhich also helps in that case to group sweeps together."	"INDEP"	""
 	"Stim Wave Checksum"	""	"1"	"The \"Stim Wave Checksum\" is a unique identifier for the stimulus set contents.\r\rChanges in this ID catches cases where the stimset has the same name but different contents."	"DEPEND"	""
@@ -64,11 +64,11 @@ BEGIN
 	"TP buffer size"	""	"0.1"	"Size of the running average window for the testpulse results."	"INDEP"	""
 	"TP during ITI"	"On/Off"	"-"	"When checked the testpulse runs during the inter-trial-interval."	"INDEP"	""
 	"Amplifier change via I=0"	"On/Off"	"-"	"Switching between voltage and current clamp passes through I=0 mode if enabled.\r\rFor theoretical details see the MultiClamp700B Manual."	"INDEP"	""
-	"Skip analysis functions"	"On/Off"	"-"	"Analysis functions attached to simulus sets are not called when enabled."	"INDEP"	""
-	"Repeat sweep on async alarm"	"On/Off"	"-"	"When an asynchronous' channel alarm is triggered (user configurable) the last sweep is continously reacquired until the alarm state is cleared."	"INDEP"	""
+	"Skip analysis functions"	"On/Off"	"-"	"Analysis functions attached to stimulus sets are not called when enabled."	"INDEP"	""
+	"Repeat sweep on async alarm"	"On/Off"	"-"	"When an asynchronous' channel alarm is triggered (user configurable) the last sweep is continuously reacquired until the alarm state is cleared."	"INDEP"	""
 	"TP after DAQ"	"On/Off"	"-"	"Run the testpulse immediately after data acquisition finished or was stopped prematurely."	"INDEP"	""
 	"Set Cycle Count"	""	"1"	"The number of stimulus set repetitions in one repeated acquisition cycle."	"DEPEND"	""
-	"Stimset Acq Cycle ID"	""	"1"	" This identifier changes if one of the folllowing properties change:\r  - Repeated acquisition cycle ID\r  - Stimulus set\r  - Stimulus set checksum\r  - Stimulus set cycle count\r\rThe primary use case is for querying all labnotebook entries of all sweeps from the current set.\rIn analysis function terms all sweeps which are acquired between pre set event and post set event, see\ralso https://alleninstitute.github.io/MIES/file/_m_i_e_s___analysis_functions_8ipf.html.\r\rA visualisation is available at https://alleninstitute.github.io/MIES/#id1."	"DEPEND"	""
+	"Stimset Acq Cycle ID"	""	"1"	" This identifier changes if one of the following properties change:\r  - Repeated acquisition cycle ID\r  - Stimulus set\r  - Stimulus set checksum\r  - Stimulus set cycle count\r\rThe primary use case is for querying all labnotebook entries of all sweeps from the current set.\rIn analysis function terms all sweeps which are acquired between pre set event and post set event, see\ralso https://alleninstitute.github.io/MIES/file/_m_i_e_s___analysis_functions_8ipf.html.\r\rA visualisation is available at https://alleninstitute.github.io/MIES/#id1."	"DEPEND"	""
 	"DAQ stop reason"	""	"-"	"Documents why data acquisition was stopped."	"INDEP"	""
 	"Digitizer Hardware Type"	""	"1"	"Hardware type (integer) of the DAEphys panel digitizer."	"INDEP"	""
 	"Fixed frequency acquisition"	"kHz"	"1"	"The sampling frequency of the digitizer in kHz when fixed frequency acquisition is enabled."	"INDEP"	""

Packages/MIES/labnotebook_textual_description.itx

@@ -5,7 +5,7 @@ BEGIN
 	"TimeStamp"	"s"	"-"	"Time Stamp: Seconds since Igor epoch (1/1/1904) in local time zone with millisecond precision. Written at time of labnotebook entry."	"ALL"	""
 	"TimeStampSinceIgorEpochUTC"	"s"	"-"	"Time Stamp: Seconds since Igor epoch (1/1/1904) in coordinated universal time zone (UTC) with millisecond precision. Written at time of labnotebook entry."	"ALL"	""
 	"EntrySourceType"	""	"-"	"Entry source type: type of the labnotebook entry, 0 for data acquisition, 1 for test pulse, NaN for all other types including user entries.\r"	"ALL"	""
-	"AcquisitionState"	""	"-"	"Stores the current numbered state of data acquistion."	"ALL"	""
+	"AcquisitionState"	""	"-"	"Stores the current numbered state of data acquisition."	"ALL"	""
 	"Stim Wave Name"	""	"-"	"Stimulus set name"	"DEPEND"	""
 	"DA unit"	""	"-"	"User-defined analog output unit. Depends on the clamp mode. Typically pA or mV."	"DEPEND"	""
 	"AD unit"	""	"-"	"User-defined analog input unit. Depends on the clamp mode. Typically pA or mV."	"DEPEND"	""
@@ -54,7 +54,7 @@ BEGIN
 	"RawOutSignalString"	""	"-"	"User-configured signal type of secondary output encoded as a string.\r\rFor more details, see the MultiClamp700B Manual."	"DEPEND"	""
 	"RawScaleFactorUnitsString"	""	"-"	"String denoting the unit of the Raw Scale Factor.\r\rFor more details see the MultiClamp700B Manual."	"DEPEND"	""
 	"User comment"	""	"-"	"Free-form user comment without a timestamp. Duplicate of entries in the user-comment notebook."	"INDEP"	""
-	"HardwareTypeString"	""	"-"	"Amplifer hardware type string. e.g., MultiClamp 700B"	"DEPEND"	""
+	"HardwareTypeString"	""	"-"	"Amplifier hardware type string. e.g., MultiClamp 700B"	"DEPEND"	""
 	"Async AD0 Title"	""	"-"	"User name of indicated asynchronous channel."	"INDEP"	""
 	"Async AD1 Title"	""	"-"	"User name of indicated asynchronous channel."	"INDEP"	""
 	"Async AD2 Title"	""	"-"	"User name of indicated asynchronous channel."	"INDEP"	""