Fix parallel handling of data in repeated trajectory runs for 'rotate… #483

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Job	Run time
build-pytraj	11m 0s
Build gnu with CMake 0	9m 9s
Build gnu with CMake 1	6m 6s
Build clang with CMake 0	9m 14s
Build clang with CMake 1	6m 36s
Build gnu with CMake 0	8m 44s
Build gnu with CMake 0	20m 56s
Build gnu with CMake 0	24m 42s
Build gnu with CMake 1	19m 50s
	1h 56m 17s