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@AnacletoLAB

AnacletoLab

Computational Biology and Bioinformatics Lab - Dept. of Computer Science - UNIMI

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  1. grape grape Public

    🍇 GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluations

    Jupyter Notebook 522 38

  2. ensmallen ensmallen Public

    🍇 Ensmallen is the Rust/Python high-performance graph processing submodule of the GRAPE library.

    Python 38 12

  3. RNA-KG RNA-KG Public

    Jupyter Notebook 13 1

  4. parSMURF parSMURF Public

    High Performance Computing imbalance-aware machine learning tool for the genome-wide detection of pathogenic variants

    Python 6 2

  5. sHAM sHAM Public

    Compact representations of convolutional neural networks via weight pruning and quantization

    Python 6 3

  6. epigenomic_dataset epigenomic_dataset Public

    Python package wrapping ENCODE epigenomic data for a number of reference cell lines.

    Jupyter Notebook 5 1

Repositories

Showing 10 of 19 repositories
  • Finenzyme Public

    Language modeling for enzyme sequences

    AnacletoLAB/Finenzyme’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Sep 18, 2024
  • hetnode2vec_ensmallen Public

    This repository provides an implementation to add Het-node2vec as a library to Grape.

    AnacletoLAB/hetnode2vec_ensmallen’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Sep 16, 2024
  • RNA-KG Public
    AnacletoLAB/RNA-KG’s past year of commit activity
    Jupyter Notebook 13 Apache-2.0 1 0 0 Updated Sep 11, 2024
  • ensmallen Public

    🍇 Ensmallen is the Rust/Python high-performance graph processing submodule of the GRAPE library.

    AnacletoLAB/ensmallen’s past year of commit activity
    Python 38 MIT 12 11 0 Updated Aug 5, 2024
  • DR_omics_integration Public

    code and material to run all the experiments for dimensionality reduction guided by block analysis, data integration, OS prediction

    AnacletoLAB/DR_omics_integration’s past year of commit activity
    R 0 0 0 0 Updated Jul 3, 2024
  • grape Public

    🍇 GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluations

    AnacletoLAB/grape’s past year of commit activity
    Jupyter Notebook 522 MIT 38 32 0 Updated Feb 24, 2024
  • sHAM Public

    Compact representations of convolutional neural networks via weight pruning and quantization

    AnacletoLAB/sHAM’s past year of commit activity
    Python 6 Apache-2.0 3 0 0 Updated Jul 18, 2023
  • obogaf-parser Public Forked from marconotaro/obogaf-parser

    a perl5 module to handle obo and gaf file

    AnacletoLAB/obogaf-parser’s past year of commit activity
    Perl 0 1 0 0 Updated Oct 14, 2022
  • godata-pipe Public Forked from marconotaro/godata-pipe

    a pipeline to build datasets for GO terms prediction

    AnacletoLAB/godata-pipe’s past year of commit activity
    Perl 0 1 0 0 Updated Oct 14, 2022
  • hemdag Public Forked from marconotaro/hemdag

    an R package implementing several Hierarchical Ensemble Methods for graphs

    AnacletoLAB/hemdag’s past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Oct 14, 2022

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