Skip to content
@AndersenLab

Andersen Lab

Johns Hopkins University

Pinned Loading

  1. CAENDR CAENDR Public

    HTML 4 3

Repositories

Showing 10 of 179 repositories
  • concordance-nf Public
    AndersenLab/concordance-nf’s past year of commit activity
    R 0 MIT 2 0 0 Updated Oct 1, 2024
  • andersenlab.github.io Public

    Andersen Lab Website

    AndersenLab/andersenlab.github.io’s past year of commit activity
    HTML 2 MIT 3 0 2 Updated Sep 29, 2024
  • cellprofiler-nf Public

    A nextflow pipeline to run CellProfiler pipelines on raw images and process output

    AndersenLab/cellprofiler-nf’s past year of commit activity
    Nextflow 1 MIT 2 6 (1 issue needs help) 1 Updated Sep 27, 2024
  • delly-nf Public

    Nextflow workflow for calling INDELs with delly

    AndersenLab/delly-nf’s past year of commit activity
    Nextflow 0 0 0 0 Updated Sep 23, 2024
  • NemaScan Public

    GWA Mapping and Simulation with C. elegans, C. tropicalis, and C. briggsae

    AndersenLab/NemaScan’s past year of commit activity
    R 2 4 8 0 Updated Sep 19, 2024
  • variantanno-sh Public

    Shells scripts to run tools (SIFT, VEP, ANNOVAR) to annotate variants in selfing Caenorhabditis WI VCFs

    AndersenLab/variantanno-sh’s past year of commit activity
    0 0 0 0 Updated Sep 19, 2024
  • CAENDR Public
    AndersenLab/CAENDR’s past year of commit activity
    HTML 4 MIT 3 0 9 Updated Sep 13, 2024
  • low_coverage_concordance Public

    Code to analyze concordance of a sequenced strain to an isotype reference strain

    AndersenLab/low_coverage_concordance’s past year of commit activity
    Shell 0 0 0 0 Updated Sep 13, 2024
  • wi-gatk Public

    The new GATK-based pipeline for wild isolate C. elegans strains

    AndersenLab/wi-gatk’s past year of commit activity
    Nextflow 1 3 6 0 Updated Aug 30, 2024
  • trim-fq-nf Public
    AndersenLab/trim-fq-nf’s past year of commit activity
    Nextflow 0 MIT 1 2 0 Updated Aug 30, 2024
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.