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A meta-graph of BioCypher modular adapters, created by a BioCypher pipeline

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BioCypher meta-graph

Information about pipelines and adapters available in BioCypher, as described on the GitHub Projects board for Components. Uses the GitHub API adapter to populate the graph and mount it on localhost:7474 using the Neo4j docker container. To run locally, you will need to have Docker installed and running. Then, you can run it using:

git clone https://github.com/biocypher/meta-graph.git
cd meta-graph
docker compose up

After the graph has been built, you can access it at http://localhost:7474. The default username and password are neo4j and neo4jpassword; they can be changed in the docker-variables.env file. Please note that the graph is created in the docker database, not the default neo4j database, so you need to switch to the docker database the first time you log in.

We will make an online version of the graph available soon.

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A meta-graph of BioCypher modular adapters, created by a BioCypher pipeline

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  • Python 94.2%
  • Dockerfile 4.0%
  • Shell 1.8%