Add support for CryoSPARC #1416
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xpillons
requested changes
Apr 5, 2023
| // MariaDB | ||
| AllowMariaDBIn : ['700', 'Inbound', 'Allow', 'Tcp', 'MariaDB', 'asg', 'asg-mariadb-client', 'subnet', 'admin'] | ||
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| // Cluster applications |
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I would try to make this generic.
| {% endfor %} | ||
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| {% if cryosparc_enabled %} |
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This for me is too application specific and we can't do this for every app. This could be solved by having single node definition, on which we could specify which cluster-init project to add
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Hi - what is the status of this. We would be interested to use az-hop for cryosparc deployment |
line 138 has an extra `{% endif % }` that causes failure during configuration
* Update slurm_cluster_info.json updated `worker_bin_path` to match install path * Update 03-install_cryosparc.sh.j2 added section to connect worker nodes to the master
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Provide option in
config.ymlto install and setup CryoSPARC on top of Slurm cluster.CryoSPARC master/worker architecture is implemented by deploying the master node as cluster login node and workload submitted to CycleCloud Slurm scheduler. CryoSPARC installation and configuration is performed via dedicated CycleCloud project. Multiple Slurm partitions can be configured as CryoSPARC lanes with the
applications.target_queuesvariable.Due to hardcoded absolute paths in CryoSPARC code the portal is not reachable through the OOD proxy. Until a suitable OOD feature is available (OSC/ondemand#2311), CryoSPARC portal is accessible in Az-HOP from a Linux interactive session. An XFCE application menu shortcut is added in Education -> CryoSPARC.