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add todo #8
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walterxie committed Nov 11, 2022
1 parent d7e0379 commit adf8267
Showing 1 changed file with 2 additions and 0 deletions.
2 changes: 2 additions & 0 deletions test/codonmodels/evolution/alignment/CodonAlignmentTest.java
Original file line number Diff line number Diff line change
Expand Up @@ -37,6 +37,7 @@ public void testGetSequence() {

@Test
public void testGettingDataType() {
//TODO
Set<String> dataTypes = BEASTClassLoader.loadService(DataType.class);
System.out.println(dataTypes);
assertTrue("Cannot load Codon data type !", dataTypes.contains(Codon.CODON));
Expand All @@ -47,6 +48,7 @@ public void testCodonUsage() {
Alignment data = CodonData.getAlig6T333();
// create Codon Alignment
CodonAlignment codonAlignment = new CodonAlignment();
//TODO
codonAlignment.initByName("data", data, "dataType", "codon", "geneticCode", "vertebrateMitochondrial");

Codon codon = codonAlignment.getDataType();
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