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@BIDS-Xu-Lab

Clinical NLP Lab

Clinical NLP Lab

Clinical NLP Lab

Led by Dr. Hua Xu at Biomedical Informatics and Data Science, Yale School of Medicine

Homepage: https://clinicalnlp.org/

The lab has been devoted to developing novel natural language processing (NLP) methods, software, and applications for diverse biomedical texts, such as clinical notes, biomedical literature, and social media. These three areas complement each other: new methods lead to software that are used by many researchers, software facilitates clinical applications, and successful applications reveal where there is need for new methods, closing the loop and forming an ecosystem of our research activities in clinical NLP.

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  1. Me-LLaMA Me-LLaMA Public

    A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks

    Python 119 11

  2. bike bike Public

    Biomedical Knowledge Explorer

    HTML 2

Repositories

Showing 10 of 15 repositories
  • BIDS-Xu-Lab.github.io Public

    Lab Webiste

    BIDS-Xu-Lab/BIDS-Xu-Lab.github.io’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 12, 2024
  • Biomedical-NLP-Benchmarks Public

    Benchmark Datasets for BioNLP Tasks

    BIDS-Xu-Lab/Biomedical-NLP-Benchmarks’s past year of commit activity
    Python 10 Apache-2.0 1 0 0 Updated Nov 1, 2024
  • SemNovel Public

    A New Approach to Detecting Semantic Novelty of Biomedical Publications using Embeddings of Large Language

    BIDS-Xu-Lab/SemNovel’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Oct 29, 2024
  • bike-datasets Public

    BIKE Datasets

    BIDS-Xu-Lab/bike-datasets’s past year of commit activity
    0 Apache-2.0 0 7 0 Updated Oct 1, 2024
  • semantic-novelty Public

    A New Approach to Detecting Semantic Novelty of Biomedical Literature

    BIDS-Xu-Lab/semantic-novelty’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Aug 26, 2024
  • Me-LLaMA Public

    A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks

    BIDS-Xu-Lab/Me-LLaMA’s past year of commit activity
    Python 119 11 1 0 Updated Jun 24, 2024
  • BIDS-Xu-Lab/LLMs4SDoH’s past year of commit activity
    0 0 0 0 Updated Jun 14, 2024
  • BIDS-Xu-Lab/LLMindcraft’s past year of commit activity
    Python 0 2 0 0 Updated Apr 25, 2024
  • clamp Public

    Clinical Language Annotation, Modeling, and Processing Toolkit

    BIDS-Xu-Lab/clamp’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Apr 17, 2024
  • bike Public

    Biomedical Knowledge Explorer

    BIDS-Xu-Lab/bike’s past year of commit activity
    HTML 2 0 0 0 Updated Apr 8, 2024

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