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@BMCV

BMCV

Biomedical Computer Vision Group

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  1. SuperDSM Public

    SuperDSM is a globally optimal segmentation method based on superadditivity and deformable shape models for cell nuclei in fluorescence microscopy images and beyond.

    Python 3 1

  2. galaxy-image-analysis Public

    Galaxy tools for image analysis

    Python 16 17

  3. docker-paraviewweb Public

    🐳 ParaViewWeb running in a docker container. This image can be used to integrate ParaViewWeb into Galaxy

    Dockerfile 11 7

  4. segmetrics Public

    Image segmentation and object detection performance measures

    Python 2

  5. ColocQuant-ColocJ Public

    Python 1

Repositories

Showing 10 of 13 repositories
  • galaxy-image-analysis Public

    Galaxy tools for image analysis

    Python 16 MIT 17 3 0 Updated Mar 7, 2025
  • giatools Public

    Tools required for Galaxy Image Analysis

    Python 0 MIT 0 0 0 Updated Mar 3, 2025
  • mobi-fs5-python Public template

    Molecular Biotechnology, Bioinformatik 5. FS, Vertiefungspraktikum Python Standard, Gruppe Rohr

    Jupyter Notebook 1 MIT 1 0 0 Updated Feb 11, 2025
  • github-workflows Public

    GitHub workflows used across many repositories

    0 MIT 0 0 0 Updated Feb 11, 2025
  • segmetrics Public

    Image segmentation and object detection performance measures

    Python 2 MIT 0 0 1 Updated Feb 11, 2025
  • mobi-fs3-python Public template

    Molecular Biotechnology, Methoden der Bioinformatik 3. FS, Bildanalyse, Programmierübungen

    Jupyter Notebook 1 MIT 0 0 0 Updated Feb 7, 2025
  • SuperDSM Public

    SuperDSM is a globally optimal segmentation method based on superadditivity and deformable shape models for cell nuclei in fluorescence microscopy images and beyond.

    Python 3 1 1 1 Updated Jan 16, 2025
  • SyntheticData Public
    0 0 0 0 Updated Aug 9, 2023
  • staged-recipes-random-name Public Forked from conda-forge/staged-recipes

    A place to submit conda recipes before they become fully fledged conda-forge feedstocks

    Python 0 BSD-3-Clause 5,177 0 0 Updated Mar 7, 2023
  • ColocQuant-ColocJ Public
    Python 1 0 0 0 Updated Aug 3, 2022
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