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Release v1.4.0
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@saramonzon saramonzon released this 20 Sep 13:30
· 169 commits to master since this release
1.4.0
a84d0ea

Added

  • Automatically annotated genes/cds are displayed differently depending on whether they are located in forward or reverse.
  • Psi-cd-hit and blast now handle threads.
  • Improved error handling.
  • Docker/Singularity compatibility.
  • One multifasta file per reference plasmid is generated with all the similar contigs from the sample.
  • Quick staus of values applied to plasmid reconstruction.
  • CircleCI testing and deployment added.
  • Possibility to choose different circos config file.

Fixed

  • Some plasmids from the database were not annotated
  • Limit sample name to 37 characters, capped by prokka
  • Bug in complete contig track generator that took the wrong value and couldn't draw sequences that matched the position 0 of plasmid#
  • Other minor fixes.
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