Merge pull request #10 from BarinthusBio/HLAF-15-data-loaders

Remove data loaders as they are not working and not needed
BarinthusBio · Aug 29, 2024 · 103d60b · 103d60b
2 parents 829fc5e + 87423ca
commit 103d60b
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diff --git a/MANIFEST.in b/MANIFEST.in
diff --git a/README.md b/README.md
@@ -10,7 +10,7 @@ ability to mount an immune response to specific epitopes.
 Automated download of allele frequency data download from 
 [allele frequencies.net](http://www.allelefrequencies.net/).
 
-Source code is available at [BarinthusBio/HLAfreq](https://github.com/BarinthusBio/HLAfreq).
+Full documentation at [HLAfreq/docs](https://BarinthusBio.github.io/HLAfreq/HLAfreq.html). Source code is available at [BarinthusBio/HLAfreq](https://github.com/BarinthusBio/HLAfreq).
 
 ## Details
 Estimates are combined by modelling allele frequency as a 
@@ -107,8 +107,6 @@ API documentation for functions are under the submodules on the left.
 - `HLAfreq.HLAfreq` documents most functions, specifically download and combine
 allele data.
 - `HLAfreq.HLAfreq_pymc` is functions using pymc to acurately estimate credible intervals on allele frequency estimates.
-- `HLAfreq.HLAfreq_data` contains data loaders to get countries available on
-allelefrequencies.net.
 
 For help on specific functions view the docstring, `help(function_name)`.
 

diff --git a/setup.py b/setup.py
@@ -31,5 +31,4 @@
     packages=find_packages(
         where='src'
     ),
-    include_package_data=True,
 )
diff --git a/src/HLAfreq/HLAfreq_data.py b/src/HLAfreq/HLAfreq_data.py