Python module genie

This Python module is for working with data from the AACR genie project. Please see the docmentation at https://Bayer-Group.github.io/genie-parser/ for details.

!!! warning

If you want to contribute to this project by pushing any commits, please copy the git hooks to .git/hooks. This is not automatically done by a git clone. See the README in the git-hooks directory.

Installation of the genie package

It is recommended to create a new virtual environment with Python >= 3.9 and to install the genie package in that environment. Activate the environment and run:

pip install "git+https://github.com/Bayer-Group/genie-parser.git"

If you want to install a particular develpment branch, use

pip install "git+https://github.com/Bayer-Group/genie-parser.git@BRANCHNAME"