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Feature/inferrer class#5

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MarcelRosier wants to merge 55 commits intomainBrainLesion/AURORA:mainfrom feature/inferrer-classBrainLesion/AURORA:feature/inferrer-classCopy head branch name to clipboard

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Commits

Commits on Nov 9, 2023

• - added poetry.lock to gitignore

  MarcelRosier

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  e49ced7

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• - created basic abstract inferer class

  MarcelRosier

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• - rename weights file to match convention

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• - add refactored version of lib (core)

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• - fixed bugs

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Commits on Nov 21, 2023

• - added logging

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  0b20c31

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• - changed enums file name to constants

  MarcelRosier

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  e4db6fd

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• - added basic cpu/gpu inferer

  MarcelRosier

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  0da769c

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• - fixed inconsistent naming

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  3693d78

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• - fix wrong usage of changed constants

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Commits on Nov 23, 2023

• - add input modes and rename to inference mode

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• - add support for nifit and np array inputs

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• - add primiotive unittest setup

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• - fixed crash for saving data after np input -> TODO

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• - add missing type annotations

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Commits on Nov 28, 2023

• - fix typo

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• Merge branch 'feature/simplify-doc-deps' into feature/inferrer-class

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Commits on Nov 30, 2023

• - rm redundant cpu class

  MarcelRosier

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• - add missing enum

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• - add more logging

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Commits on Dec 5, 2023

• - migrate to pytest

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• Merge branch 'feature/inferrer-class' of github.com:BrainLesion/AURORA into feature/inferrer-class

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• - fix config migration error

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  a0c76d9

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• - fix mssing config access

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  78c6d8b

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• - refactorings

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  3f2b72d

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• - fix wrong save file path

  MarcelRosier

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  ce29d05

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• - correct expected exception

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  6ad9149

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• Merge branch 'feature/inferrer-class' of github.com:BrainLesion/AURORA into feature/inferrer-class

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  a17bf66

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• - fix cpu inference bug

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• - imporec type error msg

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• - improve output logic

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  46fe98c

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• - rm duplicate

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  ac52c3b

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• - bug fix and output improvements

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  cbd2740

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• - simplified tests

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• - add test for extra outputs and np output

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• - add baseconfig

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• Merge branch 'feature/inferrer-class' of github.com:BrainLesion/AURORA into feature/inferrer-class

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  4e55ef6

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• - improve reference file logic

  MarcelRosier

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• add author

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  b6ddb34

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• - improve test setup

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  47832d2

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• - move dataclasses to separate file

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Commits on Dec 12, 2023

• - moved inferer code into subfolder

  MarcelRosier

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• - add basic docker inferer

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Commits on Dec 14, 2023

• - improve logging folder name

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Commits on Dec 19, 2023

• - cleanup docker related code

  MarcelRosier

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• - add docstrings

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• fixed bug on no inputs

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• - add test badge

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  d7a0f7a

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• - fix duplicate ignore

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• - rm 3.11 and 3.12 from test action

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  be5f6f4

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• - make dependencies less strict

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• -revert back to only 3.10

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Commits on Jan 16, 2024

• - test redirect stderr to logs

  MarcelRosier

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• Merge branch 'main' into feature/inferrer-class

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• Autoformat with black

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