BI-2156 - Upgrade Apache Tika to 2.3.0+

[mlm483]

Description

Story: BI-2156

• Upgraded apache tika to 2.9.2.
• Removed as many hard-coded transitive dependencies as possible.
• Hard-coded transitive dependency apache commons compress, because some tests were failing without specifying a compatible version.

Testing

You may need to do a maven clean install.

• Test uploading files, verify no unexpected errors.
• Ensure tests pass.

Checklist:

• I have performed a self-review of my own code
• I have tested my code and ensured it meets the acceptance criteria of the story
• I have tested that my code works with both the brapi-java-server and BreedBase
• I have create/modified unit tests to cover this change
• I have commented my code, particularly in hard-to-understand areas
• I have made corresponding changes to documentation
• I have run TAF: <please include a link to TAF run>

[nickpalladino]

Was able to import traits without error

[nickpalladino]

Is the commons-io.version needed?

[mlm483]

It was unnecessary, I removed it. Thanks.

[nickpalladino]

I assume tika is pulling all these in?

[mlm483]

Yes, maven pulls those in to build tika as they are dependencies of tika. I don't know how common or advisable it is to hard-code transitive dependencies with maven projects, I used trial and error to determine that maven did the right thing for all the transitive dependencies besides apache commons compress, which I hard-coded. I think the issue might have been that two primary dependencies of bi-api both depend on apache commons compress, and maven was defaulting to using a version that didn't work with tika.

[davedrp]

Passed Test