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Merge pull request #118 from wfy1997/5.0.0
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remove duplicated properties
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wfy1997 authored Oct 30, 2024
2 parents 5072f75 + bafcb8d commit 4aa2351
Showing 1 changed file with 0 additions and 75 deletions.
75 changes: 0 additions & 75 deletions model-desc/cds-model-props.yml
Original file line number Diff line number Diff line change
Expand Up @@ -230,81 +230,6 @@ PropDefinitions:
Code: '3288124'
Value: Tumor Tissue Disease Description Type
Version: '1.00'
embedding_medium:
Desc: A material that infiltrates and supports a specimen and preserves its shape and structure for sectioning and microscopy.
Req: true
Enum:
- Paraffin wax
- Carbowax
- Methacrylate
- Epoxy Resin (Araldite)
- Agar embedding
- Celloidin media
- Gelatin
- Other
- None
- Unknown
Term:
- Origin: caDSR
Original Source: HTAN
Code: '8037927'
Value: Biospecimen Collection Medium Type
Version: '1.00'
staining_method:
Desc: Any of the various methods that use a dye, reagent, or other material for producing coloration in tissues or microorganisms for microscopic examination.
Req: true
Enum:
- CODEX
- GeoMX-DSP
- H&E
- IHC
- IMC
- MIBI
- mIHC
- MxIF
- SABER
- t-CyCIF
Term:
- Origin: caDSR
Original Source: HTAN
Code: '7789196'
Value: Imaging Assay Technology Type
Version: '1.00'
objective:
Desc: "An\_objective\_is an optical element that gathers light from an object being observed and\_focuses\_the\_light rays\_from it to produce a\_real image\_of the object."
Type: string
Term:
- Origin: caDSR
Code: '7788935'
Value: Microscope Device Objective Lens Text
Version: '1.00'
nominal_magnification:
Desc: The magnification of the lens as specified by the manufacturer - i.e. '60' is a 60X lens. floating point value > 1(no units)
Type: string
Term:
- Origin: caDSR
Original Source: HTAN
Code: '7788940'
Value: Microscope Device Nominal Magnification Float Value
Version: '1.00'
immersion:
Desc: Immersion medium
Type: string
Term:
- Origin: caDSR
Original Source: HTAN
Code: '8058286'
Value: Microscope Device Immersion Medium Type
Version: '1.00'
lens_numerical_aperture:
Desc: The numerical aperture of the lens. Floating point value > 0.
Type: string
Term:
- Origin: caDSR
Original Source: HTAN
Code: '7788942'
Value: Microscope Device Lens Numerical Aperture Float Value
Version: '1.00'
working_distance:
Desc: The working distance of the lens, expressed as a floating point number. Floating point > 0. Size needs to be specified in microns (um)
Type: string
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