Code

Fixes#52

Code

Merged

dnousome merged 20 commits intomainCCBR/LOGAN:mainfrom feat_ffpeCCBR/LOGAN:feat_ffpeCopy head branch name to clipboardJun 12, 2024

+541-253

Commits

Commits on Jun 3, 2024

• fix: typos in cn, add new params

  dnousome

  committed
  22bd211

• fix: issues with cnv

  dnousome

  committed
  b8916d3

Commits on Jun 5, 2024

• feat: sage for somatic calls purple

  dnousome

  committed
  1beaba1

• fix: type

  dnousome

  committed
  2fc810a

• feat: sage changes

  dnousome

  committed
  f9b475b

Commits on Jun 6, 2024

• fix: add label for process

  dnousome

  committed
  f0d251c

• fix: sequenza process errors

  dnousome

  committed
  ca34178

• feat: add full intervals

  dnousome

  committed
  b7dec73

Commits on Jun 7, 2024

• feat: add flag for no tonly variant calling

  dnousome

  committed
  80f0345

• refactor: make cpus scale with mem

  dnousome

  committed
  1ce428c

Commits on Jun 8, 2024

• fix: use correct names in process

  dnousome

  committed
  df79736

• fix: add tonly callers to subset from

  dnousome

  committed
  efc8758

• refactor: add check for call list

  dnousome

  committed
  048dcb8

Commits on Jun 12, 2024

• fix: annotsv tcl

  dnousome

  committed
  d4d1938

• feat: default callers

  dnousome

  committed
  97bf15c

• feat: add convert gt for strelka

  dnousome

  committed
  5f54097

• fix: genome typoes

  dnousome

  committed
  0007ec3

• fix: process error

  dnousome

  committed
  e0317be

• fix: references correct

  dnousome

  committed
  79455d5

• feat: update annotsv version

  dnousome

  committed
  89917c6