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fix: strelka convert gt #60

Merged
merged 1 commit into from
Jul 22, 2024
Merged

fix: strelka convert gt #60

merged 1 commit into from
Jul 22, 2024

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dnousome
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Additional fixes to #55 to convert the GT columns correctly for strelka
Use .split vs .tokenize in groovy for consistent filename splitting

PR Checklist

(Strikethrough any points that are not applicable.)

  • This comment contains a description of changes with justifications, with any relevant issues linked.
    - [ ] Write unit tests for any new features, bug fixes, or other code changes. testing framework not yet implemented
    - [ ] Update docs if there are any API changes.
    - [ ] If a new nextflow process is implemented, define the process container and stub.
    - [ ] Update CHANGELOG.md with a short description of any user-facing changes and reference the PR number. Guidelines: https://keepachangelog.com/en/1.1.0/

@dnousome dnousome merged commit b799370 into main Jul 22, 2024
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@dnousome dnousome deleted the fix_convertStrelka branch July 22, 2024 14:07
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