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fix: use our custom snakemake & python versions #9

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merged 3 commits into from
Feb 22, 2024
Merged

fix: use our custom snakemake & python versions #9

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8da0911
fix: use our custom snakemake & python versions
kelly-sovacool Feb 21, 2024
bf8889c
docs: update changelog
kelly-sovacool Feb 21, 2024
a5c64f2
ci: remove failing action
kelly-sovacool Feb 21, 2024
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12 changes: 0 additions & 12 deletions .github/workflows/auto_add_reponame_labels.yaml
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
## TRANQUIL development version

- Redirect the website to the README. (#8, @kelly-sovacool)
- Use our custom installation of Python and Snakemake when running the pipeline with SLURM on FRCE. (#9, @kelly-sovacool)

## TRANQUIL 0.2.0

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4 changes: 2 additions & 2 deletions tranquil
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Expand Up @@ -470,8 +470,8 @@ EOF
elif [ "$HOST" == "FRCE" ];then

cat >> ${WORKDIR}/submit_script.sbatch << EOF
module load singularity
module load snakemake
export PATH=/mnt/projects/CCBR-Pipelines/bin/:${PATH}
module load singularity/3.10.5
EOF

fi
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