Patch that fixes several bugs in metadata validation and submission#244

Merged

kyleoconnell merged 8 commits intodevfrom ick4-dev-patch

Jan 6, 2025

+29-16

Commits on Jan 2, 2025

fix typo to name of a liftoff param

Jessica Rowell
authored and
Jessica Rowell
committed

Commits on Jan 3, 2025

remove duplicate description col in bacteria metadata

Jessica Rowell
authored and
Jessica Rowell
committed
copy vadr_models param from test profile to empty nextflow.config spot

Jessica Rowell
authored and
Jessica Rowell
committed
fix metadata validation to accept any valid string for populate_fields() function, not just empty str or Not Provided

Jessica Rowell
authored and
Jessica Rowell
committed

Commits on Jan 5, 2025

make backwards compatible to old version of metadata (accept author colname)

Jessica Rowell
authored and
Jessica Rowell
committed

Commits on Jan 6, 2025

make title optional in submission

Jessica Rowell
authored and
Jessica Rowell
committed
fix update_submission to not check for gb if not submitting there

Jessica Rowell
authored and
Jessica Rowell
committed
make fasta_file optional in update_submission module

Jessica Rowell
authored and
Jessica Rowell
committed