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Merge pull request #657 from CGATOxford/{IS}-py312 #132

Merge pull request #657 from CGATOxford/{IS}-py312

Merge pull request #657 from CGATOxford/{IS}-py312 #132

Workflow file for this run

name: Python package
on: [push, pull_request, workflow_dispatch]
jobs:
build:
runs-on: ${{ matrix.os }}
strategy:
matrix:
python-version: ["3.7", "3.8", "3.9"]
os: [ubuntu-latest]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }} on ${{ matrix.os }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install flake8 nose pep8 pyyaml
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Install
run: |
python setup.py install
- name: Test with nosetests
run: |
export PYTHONHASHSEED=0
nosetests -v tests/test_umi_tools.py