prepare-for-rsem no longer works

[anoronh4]

seems as though the prepare-for-rsem tool no longer works, as of version 1.1.3. has it been deprecated or replaced by something else? if the latter, can you elaborate on the new usage to achieve the same output?

[IanSudbery]

It should work, it's not been deprecated. Let me investigate.

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On Thu, 19 Oct 2023, 18:30 Anne Marie Noronha, ***@***.***> wrote: seems as though the prepare-for-rsem tool no longer works, as of version 1.1.3. has it been deprecated or replaced by something else? if so, can you elaborate on the new usage to achieve the same output? — Reply to this email directly, view it on GitHub <#607>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABJELDTYZQHGYV6XSD23QDDYAFPU7AVCNFSM6AAAAAA6HSIIWWVHI2DSMVQWIX3LMV43ASLTON2WKOZRHE2TENZVGIZDIOA> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[TomSmithCGAT]

This should be solved now. See #609