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put test_import.py and test_style.py back #391

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merged 1 commit into from
Apr 5, 2018
Merged

put test_import.py and test_style.py back #391

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2 changes: 2 additions & 0 deletions .travis.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -30,6 +30,8 @@ env:
- CGAT_TASK_ID=51
- CGAT_TASK_ID=101
- CGAT_TASK_ID=151
- TEST_IMPORT=1
- TEST_STYLE=1

# Using xvfb to Run Tests That Require a GUI
# NOTE: The "before_script" section below does not work properly, but right now is not required
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2 changes: 1 addition & 1 deletion CGAT/scripts/bed2bed.py
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Expand Up @@ -171,6 +171,7 @@
import pysam
import csv


def filterNames(iterator, names):
""" Select only those intervals whose name is in names """

Expand Down Expand Up @@ -613,7 +614,6 @@ def main(argv=sys.argv):
if not len(chr_map.keys()) > 0:
raise ValueError("Empty mapping dictionnary")


processor = Bed.iterator(options.stdin)

for method in options.methods:
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