Code

split hazard module#871

Code

Merged

emanuel-schmid merged 234 commits intodevelopCLIMADA-project/climada_python:developfrom feature/split_hazard_moduleCLIMADA-project/climada_python:feature/split_hazard_moduleCopy head branch name to clipboardMay 8, 2024

+1,641-1,565

Commits

Commits on Apr 27, 2023

• Add geodataframe to centroids: first commit

  

  Chahan Kropf

  committed
  8cf5e0a

Commits on Jun 21, 2023

• Merge branch 'develop' into feature/centroids_as_gdf

  

  Chahan Kropf

  committed
  e2a2a05

• Remove raster methods, obsolete methods, and fix some.

  

  Chahan Kropf

  committed
  89b4051

• Remove test for removed methods

  

  Chahan Kropf

  committed
  70ea2fb

• Fix from geodataframe method

  

  Chahan Kropf

  committed
  e34bc0f

Commits on Jun 22, 2023

• Remove set meta to lat lon

  

  Chahan Kropf

  committed
  02b4a8b

Commits on Jun 29, 2023

• Update all I/O methods

  

  Chahan Kropf

  committed
  5ede9bd

Commits on Jul 14, 2023

• Remove area pixel

  

  Chahan Kropf

  committed
  98a898e

Commits on Jul 17, 2023

• Add method to compute the area per pixel (not attribute)

  

  Chahan Kropf

  committed
  c77a2d9

Commits on Jul 18, 2023

• Make get_area_pixel

  

  Chahan Kropf

  committed
  913c0f1

• Remove not often used dist_coast and elevation

  

  Chahan Kropf

  committed
  5ec2859

Commits on Aug 7, 2023

• Remove unused meta

  

  Chahan Kropf

  committed
  e2ac9b7

• Change Centroids call to new signature

  

  Chahan Kropf

  committed
  5dd4ffe

Commits on Aug 8, 2023

• Remove vector - raster hazard methods

  

  Chahan Kropf

  committed
  950a722

• Restore legacy excell reader

  

  Chahan Kropf

  committed
  923b066

• Remove clear method

  

  Chahan Kropf

  committed
  abfff60

• Remove clear test

  

  Chahan Kropf

  committed
  8e360e6

• Update read/write centroids in hazard

  

  Chahan Kropf

  committed
  73c4392

• Support empty on land or region id

  

  Chahan Kropf

  committed
  0dc0abb

• Check for empty region id

  

  Chahan Kropf

  committed
  c2f626a

• Set region id correctly

  

  Chahan Kropf

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  bdf77d2

• Remove scheduler

  

  Chahan Kropf

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  cf0128d

• Add docstring

  

  Chahan Kropf

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  4f40def

• Add legacy read hdf5

  

  Chahan Kropf

  committed
  5f520fb

• Replace incorrect dot product

  

  Chahan Kropf

  committed
  7c24df0

Commits on Aug 11, 2023

• Remove meta in assign centroids

  

  Chahan Kropf

  committed
  e4bb789

• Remove matlab test file

  

  Chahan Kropf

  committed
  3df5a4b

Commits on Aug 15, 2023

• Update set lat/lon

  

  Chahan Kropf

  committed
  7206446

• Update test with init

  

  Chahan Kropf

  committed
  d4d5e02

Commits on Sep 22, 2023

• Add note on method

  

  Chahan Kropf

  committed
  a94d7af

Commits on Sep 28, 2023

• Merge tag 'v4.0.1' into feature/centroids_as_gdf

  

  Chahan Kropf

  committed
  df6c3f4

• Add from_meta class method

  

  Chahan Kropf

  committed
  cbab08e

• Update centroids init

  

  Chahan Kropf

  committed
  5aeb35e

• Update read raster intensity / fraction data

  

  Chahan Kropf

  committed
  fb374d3

• Merge branch 'develop' into feature/centroids_as_gdf

  

  Chahan Kropf

  committed
  4119f33

Commits on Sep 29, 2023

• undo changelog duplications

  emanuel-schmid

  committed
  2390c5a

Commits on Oct 13, 2023

• Merge branch 'develop' into feature/centroids_as_gdf

  

  Chahan Kropf

  committed
  4b1279e

• Update test for points outside of raster within threshold

  

  Chahan Kropf

  committed
  315f7d9

• Docstring and cosmetics

  

  Chahan Kropf

  committed
  2b1ac74

• Add to default crs method

  

  Chahan Kropf

  committed
  bab8c70

• Fix legacy from hdf5 for empty extra values

  

  Chahan Kropf

  committed
  fe96975

• Update legacy from_hdf5 to exclude 'latitude'/'longitude' from extra

  

  Chahan Kropf

  committed
  a4cf3ce

Commits on Nov 21, 2023

• Merge remote-tracking branch 'origin/develop' into feature/centroids_as_gdf

  

  Chahan Kropf

  committed
  9ce8e56

• Update centroids.select to work properly with mask and indices

  

  Chahan Kropf

  committed
  b22677f

• Fix forecast translate bug

  

  Chahan Kropf

  committed
  1946bca

• Remove _set_centroids

  

  Chahan Kropf

  committed
  b2c0c74

• Remove reproject raster

  

  Chahan Kropf

  committed
  6226bff

• Remove test hazard raster

  

  Chahan Kropf

  committed
  dc8d638

• Update naming for plot fraction centroids

  

  Chahan Kropf

  committed
  7002a52

• Replace HAZ_DEMO_MAT with HAZ_TEST_TC

  

  Chahan Kropf

  committed
  73ee79e

Commits on Nov 22, 2023

• Replace mat file with hdf5 test file

  

  Chahan Kropf

  committed
  0cabeac

• Rewrite write raster method for hazard

  

  Chahan Kropf

  committed
  3729248

• Add a default for sel_cen in mask

  

  Chahan Kropf

  committed
  6c3d1ac

• Correct indent typos

  

  Chahan Kropf

  committed
  8b15107

Commits on Nov 23, 2023

• Change duplicate test function name

  

  Chahan Kropf

  committed
  f3af2dd

• Replace mat file with hdf5

  

  Chahan Kropf

  committed
  5888dea

• Remove unused mat file import

  

  Chahan Kropf

  committed
  e22c857

• Add legacy code to read old centroid hdf5 files.

  

  Chahan Kropf

  committed
  847736b

• Update access to centroids dist coast in gdf

  

  Chahan Kropf

  committed
  756c587

• test_trop_cyclone: get test centroids from data api

  emanuel-schmid

  committed
  e015000

• Merge remote-tracking branch 'origin/develop' into feature/centroids_as_gdf

  emanuel-schmid

  committed
  b0dfd66

Commits on Nov 24, 2023

• Add method to estimate meta raster from centroids

  

  Chahan Kropf

  committed
  cfecf10

• Remove unecessary conversion to ne_geom

  

  Chahan Kropf

  committed
  510f53f

• Add good lat/lon values for unit test

  

  Chahan Kropf

  committed
  e108432

Commits on Nov 29, 2023

• centroids.centr.write_hdf5: eliminate side effect

  emanuel-schmid

  committed
  5571755

• centroids.centr.write_hdf5: elimination of side effect futile for pandas>=2.1

  emanuel-schmid

  committed
  baf88a0

• centroids.test.TestCentroidsFuns.test_select_pass: adapt to downsized LAT/LON arrays

  emanuel-schmid

  committed
  5b37116

• test_vec_ras: fix TestCentroids.test_centroids_check_pass

  emanuel-schmid

  committed
  78811c5

• test_vec_ras: remove TestReader.test_write_read_points_h5 as it is redundant

  Show description for 84de9bf
  emanuel-schmid

  committed
  84de9bf

Commits on Dec 4, 2023

• fix typo in from_exposures method

  sarah-hlsn

  committed
  1ab1b69

• centroids.centr.from_csv: write class method

  sarah-hlsn

  committed
  19b02a5

Commits on Dec 5, 2023

• centroids.centr.from_csv: correct order of xy

  sarah-hlsn

  committed
  5e4e03d

• centroids.centr.from_excel: update method for gdf

  sarah-hlsn

  committed
  a426247

• centroids.centr. update csv and excel methods

  sarah-hlsn

  committed
  c60e50f

• Update tests in test_vec_ras

  

  Chahan Kropf

  committed
  ae6a0cc

• Update more tests and remove some with meta

  

  Chahan Kropf

  committed
  fbf28d4

• Merge remote-tracking branch 'origin/feature/centroids_as_gdf' into feature/centroids_as_gdf

  sarah-hlsn

  committed
  b3ae8c4

• centroids.centr.from_excel fix columnn indexing

  sarah-hlsn

  committed
  929f0e1

• Add possibility to NOT recenter crs for countires.

  Show description for 17ee8b1
  

  Chahan Kropf

  committed
  17ee8b1

• Add to_csre convenience method

  

  Chahan Kropf

  committed
  e58aef2

• Prepare the stage for setting other than admin0 region id

  

  Chahan Kropf

  committed
  b70a0f4

• Remove uneeded import

  

  Chahan Kropf

  committed
  494d416

Commits on Dec 6, 2023

• cenctroids.centr: fix the obvious

  emanuel-schmid

  committed
  448cf77

• gencenctroids.centr: change crs of the geodataframe instead of the geometry

  emanuel-schmid

  committed
  c736356

• white space cosmetics

  emanuel-schmid

  committed
  2880bcc

• PEP8

  emanuel-schmid

  committed
  8cc88e7

• Add solid region id and on land tests

  

  Chahan Kropf

  committed
  11a6439

• Merge branch 'feature/centroids_as_gdf' of https://github.com/CLIMADA-project/climada_python into feature/centroids_as_gdf

  

  Chahan Kropf

  committed
  a1fce1d

• Auto stash before merge of "feature/centroids_as_gdf" and "origin/feature/centroids_as_gdf"

  

  Chahan Kropf

  committed
  bfcfc01

• Update distance and area tests

  

  Chahan Kropf

  committed
  4a4aed7

• Update set crs in load vector shape file

  

  Chahan Kropf

  committed
  4460955

• centr.Centroids.from_excel: deal with region_id column

  emanuel-schmid

  committed
  37c54ea

• Merge branch 'feature/centroids_as_gdf' of github.com:CLIMADA-project/climada_python into feature/centroids_as_gdf

  emanuel-schmid

  committed
  e4bc0db

Commits on Dec 7, 2023

• Fix write hazard raster with centroids.get_meta

  

  Chahan Kropf

  committed
  b02ae1d

• Merge branch 'feature/centroids_as_gdf' of https://github.com/CLIMADA-project/climada_python into feature/centroids_as_gdf

  sarah-hlsn

  committed
  cf3f6e5

• Area pixel now correctly uses CEA

  

  Chahan Kropf

  committed
  b3448d0

• Add actual NE CRS test.

  

  Chahan Kropf

  committed
  2beb6a3

• Make on_land and region_id always part of centroids

  

  Chahan Kropf

  committed
  a7eb166

• Update docstring

  

  Chahan Kropf

  committed
  147ee0d

• Update import path

  

  Chahan Kropf

  committed
  445194b

• Add overwrite argument to set region id and on land

  

  Chahan Kropf

  committed
  425b9ce

• Remove from base grid method

  

  Chahan Kropf

  committed
  b879ca6

• Fix some linting

  

  Chahan Kropf

  committed
  d63fc8b

• Add some docstrings

  

  Chahan Kropf

  committed
  70928bd

• Avoid costly computation in from geodataframe

  

  Chahan Kropf

  committed
  b97491c

• Add comment

  

  Chahan Kropf

  committed
  d9e98ce

• Fix typo

  

  Chahan Kropf

  committed
  274cf20

• Merge branch 'feature/centroids_as_gdf' of https://github.com/CLIMADA-project/climada_python into feature/centroids_as_gdf

  sarah-hlsn

  committed
  8101e3d

• Fix set crs in from geodataframe

  

  Chahan Kropf

  committed
  42634bb

• Make properties return arrays and not series

  

  Chahan Kropf

  committed
  8727895

• Remove not needed matlab vars

  

  Chahan Kropf

  committed
  429e74c

• Revert return numpy arrays.

  

  Chahan Kropf

  committed
  fb7c7cc

Commits on Dec 8, 2023

• update from excel

  sarah-hlsn

  committed
  dd212db

• Merge branch 'feature/centroids_as_gdf' of https://github.com/CLIMADA-project/climada_python into feature/centroids_as_gdf

  sarah-hlsn

  committed
  5996714

• update from_excel and from_csv

  sarah-hlsn

  committed
  164e689

• centroids.centr: from_excel fix column renaming and adapt to "new argument names"

  emanuel-schmid

  committed
  4079f3f

• Centroids.from_excel fix: switch key,val in test_storm_europe rather than in centr!

  emanuel-schmid

  committed
  dd7e4cd

Commits on Dec 11, 2023

• Return numpy arrays instead of series

  

  Chahan Kropf

  committed
  f6b72ed

Commits on Dec 12, 2023

• Add some basic tests

  

  Chahan Kropf

  committed
  61f3c6b

• Add tests for meta

  

  Chahan Kropf

  committed
  adce3c1

• Add tentative changelog.

  

  Chahan Kropf

  committed
  9653e98

• Make keywords argument only : name lat/lon : remove set_*

  

  Chahan Kropf

  committed
  8e13e61

• Auto stash before revert of "Make keywords argument only : name lat/lon : remove set_*"

  

  Chahan Kropf

  committed
  43c2f1b

• remove file

  

  Chahan Kropf

  committed
  32a4be9

• Merge branch 'local/geodataframe_temp' into feature/centroids_as_gdf

  

  Chahan Kropf

  committed
  d1475d8

• Fix exposures method test

  

  Chahan Kropf

  committed
  2464066

Commits on Dec 13, 2023

• Merge remote-tracking branch 'origin/develop' into feature/centroids_as_gdf

  

  Chahan Kropf

  committed
  bd5629c

• Fix setting region id and on land at init.

  

  Chahan Kropf

  committed
  d031a79

• Fix typo

  

  Chahan Kropf

  committed
  a1040f8

• Fix all close values for big numbers

  

  Chahan Kropf

  committed
  a748ee0

• Improve cosmetics.

  

  Chahan Kropf

  committed
  652a2b8

Commits on Dec 14, 2023

• update docstrings, doc cosmetics

  idetring

  committed
  6806331

Commits on Dec 18, 2023

• update from_csv method, add test

  sarah-hlsn

  committed
  25a0930

• remove DEF_VAR_CSV

  sarah-hlsn

  committed
  5849acb

Commits on Dec 20, 2023

• Update from_excel method and test

  sarah-hlsn

  committed
  84107ee

• remove unnecessary import

  sarah-hlsn

  committed
  bfb24d7

• fix storm_europe tests

  sarah-hlsn

  committed
  67a1d60

Commits on Jan 3, 2024

• improve csv and excel tests

  sarah-hlsn

  committed
  8f25d1f

• Apply suggestions from code review

  Show description for 0f54053
  

  chahank

  and

  peanutfun

  authored
  0f54053

Commits on Jan 4, 2024

• add excel, csv write methods and tests

  sarah-hlsn

  committed
  c4bb540

• Merge branch 'feature/centroids_as_gdf' of https://github.com/CLIMADA-project/climada_python into feature/centroids_as_gdf

  sarah-hlsn

  committed
  3f4ebb6

• Replace gdf with _gdf

  

  Chahan Kropf

  committed
  c7e6ffd

• Revert "Replace gdf with _gdf"

  Show description for 79cd84b
  

  Chahan Kropf

  committed
  79cd84b

Commits on Jan 5, 2024

• Update to_crs methods

  

  Chahan Kropf

  committed
  e5dffd9

• Raise error if wrong exposures

  

  Chahan Kropf

  committed
  1f6ec54

• Make from geodataframe more restrictive.

  

  Chahan Kropf

  committed
  f59278c

• Use consistently to_crs method

  

  Chahan Kropf

  committed
  4c641dc

• Improve read centroids

  

  Chahan Kropf

  committed
  e5c1c73

Commits on Jan 8, 2024

• Add literal to import

  

  Chahan Kropf

  committed
  26e2702

• Update to crs with inplace argument

  

  Chahan Kropf

  committed
  e6fa996

• improve excel, csv method, test based on review

  sarah-hlsn

  committed
  37b5d19

• Update typing

  

  Chahan Kropf

  committed
  622d326

• Fix equal centroids for different gdf columns ordering

  

  Chahan Kropf

  committed
  a7311a0

• Make consistent gdf column ordering

  

  Chahan Kropf

  committed
  99203ad

• Simplify from excel/csv

  

  Chahan Kropf

  committed
  e5cd4ad

• Add support for legacy hazard excell

  

  Chahan Kropf

  committed
  58360a5

• Avoid single column loading error for df

  

  Chahan Kropf

  committed
  2f248b8

Commits on Jan 9, 2024

• fix path in write_excel, write_csv

  sarah-hlsn

  committed
  19cae86

• fixing docstrings in centr.py

  idetring

  committed
  19fe589

Commits on Jan 10, 2024

• Update code cosmetics

  

  Chahan Kropf

  committed
  5ccc278

• Fix typo

  

  Chahan Kropf

  committed
  ee512ca

Commits on Jan 18, 2024

• Allo for kwargs in init and update from exposures

  

  Chahan Kropf

  committed
  4053565

• Merge branch 'develop' into feature/centroids_as_gdf

  Show description for fc0c7ec
  emanuel-schmid

  committed
  fc0c7ec

• Merge branch 'feature/centroids_as_gdf' of https://github.com/CLIMADA-project/climada_python into feature/centroids_as_gdf

  emanuel-schmid

  committed
  a30a7c4

Commits on Jan 22, 2024

• Merge branch 'develop' into feature/centroids_as_gdf

  Show description for 5404dba
  emanuel-schmid

  committed
  5404dba

Commits on Jan 24, 2024

• code linting

  

  Thomas Vogt

  committed
  4d62101

• Centroids: test from_meta

  

  Thomas Vogt

  committed
  1ba2ade

• Centroids: refined tests

  

  Thomas Vogt

  committed
  62df2dd

• Centroids: fix from_exposures

  

  Thomas Vogt

  committed
  a7b8cf9

• Centroids: implement get_pixel_shapes

  

  Thomas Vogt

  committed
  e514195

Commits on Jan 25, 2024

• Centroids: code linting and docstrings

  

  Thomas Vogt

  committed
  ec11611

Commits on Jan 29, 2024

• hazard.test.test_base: remove undefined classes from main

  emanuel-schmid

  committed
  e77af81

Commits on Jan 30, 2024

• hazard.base: remove unused imports

  emanuel-schmid

  committed
  bba7e49

• hazard.base: clean up imports

  

  Thomas Vogt

  committed
  655b749

• Merge branch 'develop' into feature/centroids_as_gdf

  emanuel-schmid

  committed
  03676d8

• cosmetics

  emanuel-schmid

  committed
  7dfa631

• hazard.base.write_htdf5: add inline comment.

  emanuel-schmid

  committed
  eda2755

Commits on Jan 31, 2024

• Centroids: fix _gdf_from_legacy_hdf signature

  emanuel-schmid

  committed
  8fcf3b3

• Centroids._gdf_from_legacy_hdf5: static, not classmethod

  

  Thomas Vogt

  committed
  57fd369

• Merge branch 'develop' into feature/centroids_as_gdf

  emanuel-schmid

  committed
  4ffd744

• hazard.centroids.centr: pylint

  emanuel-schmid

  committed
  ddb6dcc

• centroids.centr : fix pydoc typos and pylint

  emanuel-schmid

  committed
  bd1f9fd

• climada.hazard.base: pylint

  emanuel-schmid

  committed
  31aba1c

• hazard.centroids.centr: pylint

  emanuel-schmid

  committed
  b84a76d

• climada.test.test_calicbration: use hzard test file with hdf5 format

  emanuel-schmid

  committed
  b1b0efa

Commits on Feb 1, 2024

• Update climada/hazard/centroids/test/test_vec_ras.py

  Show description for 473bc9d
  

  tovogt

  and

  emanuel-schmid

  authored
  473bc9d

• Hazard: fix write_raster, and some docstrings

  

  Thomas Vogt

  committed
  017864e

Commits on Feb 7, 2024

• test.test_calibration: fix test file name

  emanuel-schmid

  committed
  441fbb1

• Merge branch 'feature/centroids_as_gdf' of github.com:CLIMADA-project/climada_python into feature/centroids_as_gdf

  emanuel-schmid

  committed
  0cd3530

• test_api_client: added test for basic centroids plotting

  Show description for db748c7
  emanuel-schmid

  committed
  db748c7

Commits on Feb 8, 2024

• centr.Centroids.plot: all changes reverted

  Show description for 5863cb2
  emanuel-schmid

  committed
  5863cb2

• Hazard tutorial: use centroids.get_meta() instead of the attribute meta

  emanuel-schmid

  committed
  3dd4a50

• Hazard tutorial: use Centroids() instead of from_lat_lon()

  emanuel-schmid

  committed
  065c868

• Merge branch 'develop' into feature/centroids_as_gdf

  emanuel-schmid

  committed
  5e1d9ff

Commits on Feb 9, 2024

• hazard tutorial: update Hazard from raster section

  emanuel-schmid

  committed
  f6f7db8

• hazard tutorial: fix dist_coast access

  emanuel-schmid

  committed
  ead5e05

• climada.hazard.Hazard: remove broken vector file support

  emanuel-schmid

  committed
  693af77

• split hazard.base module into base, base_io and base_plot

  emanuel-schmid

  committed
  d1a1a04

• test_base_xarray: logs format changed due to "sub-modules"

  emanuel-schmid

  committed
  d07d7ac

• climada.hazard.HazardIO: remove broken vector file support

  emanuel-schmid

  committed
  2ed47fb

• hazard.base_io: remove from_mat, move reproject_vector back to base

  emanuel-schmid

  committed
  8a55fd6

• rename test_base_xarray

  emanuel-schmid

  committed
  bf73386

• hazard.test: move TestReadExcel and TestReadHDF5 to test_base_io

  emanuel-schmid

  committed
  81883ff

• climada.hazard.test.base/_io: fix imports

  emanuel-schmid

  committed
  5c60bd8

Commits on Feb 14, 2024

• Merge branch 'develop' into feature/centroids_as_gdf

  Show description for 1f45167
  emanuel-schmid

  committed
  1f45167

Commits on Feb 15, 2024

• climada.hazard.centr: add deprecated methods section

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• Merge branch 'develop' into feature/centroids_as_gdf

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• fix from_tracks method, remove side effect

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• climada.hazard.trop_cyclone.TropCytlone.from_tracks: option for predefined dist_coast in centroids

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• TropicalCyclone.from_tracks pydoc

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Commits on Feb 16, 2024

• white space cosmetics

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• CHANGELOG: list deprecated and removed methods

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Commits on Feb 20, 2024

• Refactor and add to centroids testing

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Commits on Feb 21, 2024

• Merge branch 'develop' into feature/centroids_as_gdf

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• Merge branch 'develop' into feature/centroids_as_gdf

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• Merge branch 'develop' into feature/centroids_as_gdf

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• trop_cyclone.TropCyclone.from_tracks: fix dist_coast type

  emanuel-schmid

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Commits on Feb 23, 2024

• climada.hazard.Centroids: raise exception in deprecated methods that really _are_ failing now

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• Merge branch 'feature/centroids_as_gdf' into feature/split_hazard_module

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• redo lost commits on hazard.base

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Commits on Feb 26, 2024

• changelog: list added Centroids methods

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Commits on Mar 14, 2024

• hazard.centr: depreecated methods: pydoc string instaed of pass

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• Merge branch 'develop' into feature/centroids_as_gdf

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• fixing geodataframe issues

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• Merge branch 'develop' into feature/centroids_as_gdf

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• Revert "fixing geodataframe issues"

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• Merge branch 'feature/centroids_as_gdf' into feature/split_hazard_module

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Commits on Apr 12, 2024

• Merge branch 'develop' into feature/split_hazard_module

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• Changelog and module renaming

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• Changelog and module renaming

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• module renaming

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Commits on Apr 15, 2024

• Merge branch 'develop' into feature/split_hazard_module

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Commits on Apr 16, 2024

• Merge branch 'develop' into feature/split_hazard_module

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Commits on May 8, 2024

• Merge branch 'feature/exposures_crs' into feature/split_hazard_module

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