Bump the pip group with 3 updates

[dependabot]

Bumps the pip group with 3 updates: numpy, setuptools and wheel.

Updates numpy from 1.21.5 to 1.22.0

Release notes

Sourced from numpy's releases.

v1.22.0

NumPy 1.22.0 Release Notes

NumPy 1.22.0 is a big release featuring the work of 153 contributors spread over 609 pull requests. There have been many improvements, highlights are:

• Annotations of the main namespace are essentially complete. Upstream is a moving target, so there will likely be further improvements, but the major work is done. This is probably the most user visible enhancement in this release.
• A preliminary version of the proposed Array-API is provided. This is a step in creating a standard collection of functions that can be used across application such as CuPy and JAX.
• NumPy now has a DLPack backend. DLPack provides a common interchange format for array (tensor) data.
• New methods for quantile, percentile, and related functions. The new methods provide a complete set of the methods commonly found in the literature.
• A new configurable allocator for use by downstream projects.

These are in addition to the ongoing work to provide SIMD support for commonly used functions, improvements to F2PY, and better documentation.

The Python versions supported in this release are 3.8-3.10, Python 3.7 has been dropped. Note that 32 bit wheels are only provided for Python 3.8 and 3.9 on Windows, all other wheels are 64 bits on account of Ubuntu, Fedora, and other Linux distributions dropping 32 bit support. All 64 bit wheels are also linked with 64 bit integer OpenBLAS, which should fix the occasional problems encountered by folks using truly huge arrays.

Expired deprecations

Deprecated numeric style dtype strings have been removed

Using the strings "Bytes0", "Datetime64", "Str0", "Uint32", and "Uint64" as a dtype will now raise a TypeError.

(gh-19539)

Expired deprecations for loads, ndfromtxt, and mafromtxt in npyio

numpy.loads was deprecated in v1.15, with the recommendation that users use pickle.loads instead. ndfromtxt and mafromtxt were both deprecated in v1.17 - users should use numpy.genfromtxt instead with the appropriate value for the usemask parameter.

(gh-19615)

... (truncated)

Commits

• 4adc87d Merge pull request #20685 from charris/prepare-for-1.22.0-release
• fd66547 REL: Prepare for the NumPy 1.22.0 release.
• 125304b wip
• c283859 Merge pull request #20682 from charris/backport-20416
• 5399c03 Merge pull request #20681 from charris/backport-20954
• f9c45f8 Merge pull request #20680 from charris/backport-20663
• 794b36f Update armccompiler.py
• d93b14e Update test_public_api.py
• 7662c07 Update init.py
• 311ab52 Update armccompiler.py
• Additional commits viewable in compare view

Updates setuptools from 63.4.1 to 70.0.0

Changelog

Sourced from setuptools's changelog.

v70.0.0

Features

• Emit a warning when [tools.setuptools] is present in pyproject.toml and will be ignored. -- by :user:SnoopJ (#4150)
• Improved AttributeError error message if pkg_resources.EntryPoint.require is called without extras or distribution Gracefully "do nothing" when trying to activate a pkg_resources.Distribution with a None location, rather than raising a TypeError -- by :user:Avasam (#4262)
• Typed the dynamically defined variables from pkg_resources -- by :user:Avasam (#4267)
• Modernized and refactored VCS handling in package_index. (#4332)

Bugfixes

• In install command, use super to call the superclass methods. Avoids race conditions when monkeypatching from _distutils_system_mod occurs late. (#4136)
• Fix finder template for lenient editable installs of implicit nested namespaces constructed by using package_dir to reorganise directory structure. (#4278)
• Fix an error with UnicodeDecodeError handling in pkg_resources when trying to read files in UTF-8 with a fallback -- by :user:Avasam (#4348)

Improved Documentation

• Uses RST substitution to put badges in 1 line. (#4312)

Deprecations and Removals

• Further adoption of UTF-8 in setuptools. This change regards mostly files produced and consumed during the build process (e.g. metadata files, script wrappers, automatically updated config files, etc..) Although precautions were taken to minimize disruptions, some edge cases might be subject to backwards incompatibility.

  Support for "locale" encoding is now deprecated. (#4309)

• Remove setuptools.convert_path after long deprecation period. This function was never defined by setuptools itself, but rather a side-effect of an import for internal usage. (#4322)

• Remove fallback for customisations of distutils' build.sub_command after long deprecated period. Users are advised to import build directly from setuptools.command.build. (#4322)

• Removed typing_extensions from vendored dependencies -- by :user:Avasam (#4324)

• Remove deprecated setuptools.dep_util. The provided alternative is setuptools.modified. (#4360)

... (truncated)

Commits

• 5cbf12a Workaround for release error in v70
• 9c1bcc3 Bump version: 69.5.1 → 70.0.0
• 4dc0c31 Remove deprecated setuptools.dep_util (#4360)
• 6c1ef57 Remove xfail now that test passes. Ref #4371.
• d14fa01 Add all site-packages dirs when creating simulated environment for test_edita...
• 6b7f7a1 Prevent bin folders to be taken as extern packages when vendoring (#4370)
• 69141f6 Add doctest for vendorised bin folder
• 2a53cc1 Prevent 'bin' folders to be taken as extern packages
• 7208628 Replace call to deprecated validate_pyproject command (#4363)
• 96d681a Remove call to deprecated validate_pyproject command
• Additional commits viewable in compare view

Updates wheel from 0.37.1 to 0.38.1

Changelog

Sourced from wheel's changelog.

Release Notes

0.45.0 (2024-11-08)

• Refactored the convert command to not need setuptools to be installed

• Don't configure setuptools logging unless running bdist_wheel

• Added a redirection from wheel.bdist_wheel.bdist_wheel to setuptools.command.bdist_wheel.bdist_wheel to improve compatibility with setuptools' latest fixes.

  Projects are still advised to migrate away from the deprecated module and import the setuptools' implementation explicitly. (PR by @​abravalheri)

0.44.0 (2024-08-04)

• Canonicalized requirements in METADATA file (PR by Wim Jeantine-Glenn)
• Deprecated the bdist_wheel module, as the code was migrated to setuptools itself

0.43.0 (2024-03-11)

• Dropped support for Python 3.7
• Updated vendored packaging to 24.0

0.42.0 (2023-11-26)

• Allowed removing build tag with wheel tags --build ""
• Fixed wheel pack and wheel tags writing updated WHEEL fields after a blank line, causing other tools to ignore them
• Fixed wheel pack and wheel tags writing WHEEL with CRLF line endings or a mix of CRLF and LF
• Fixed wheel pack --build-number "" not removing build tag from WHEEL (above changes by Benjamin Gilbert)

0.41.3 (2023-10-30)

• Updated vendored packaging to 23.2
• Fixed ABI tag generation for CPython 3.13a1 on Windows (PR by Sam Gross)

0.41.2 (2023-08-22)

• Fixed platform tag detection for GraalPy and 32-bit python running on an aarch64 kernel (PR by Matthieu Darbois)
• Fixed wheel tags to not list directories in RECORD files (PR by Mike Taves)
• Fixed ABI tag generation for GraalPy (PR by Michael Simacek)

0.41.1 (2023-08-05)

... (truncated)

Commits

• 6f1608d Created a new release
• cf8f5ef Moved news item from PR #484 to its proper place
• 9ec2016 Removed install dependency on setuptools (#483)
• 747e1f6 Fixed PyPy SOABI parsing (#484)
• 7627548 [pre-commit.ci] pre-commit autoupdate (#480)
• 7b9e8e1 Test on Python 3.11 final
• a04dfef Updated the pypi-publish action
• 94bb62c Fixed docs not building due to code style changes
• d635664 Updated the codecov action to the latest version
• fcb94cd Updated version to match the release
• Additional commits viewable in compare view

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