Fix miscellaneous spelling errors

data/inputs/ptcombust.cti

@@ -18,7 +18,7 @@
 #****                                                                  *
 #***********************************************************************
 #
-#  Ref:- 1.) Deutschman et al., 26th Symp. (Intl.) on Combustion,1996
+#  Ref:- 1.) Deutschmann et al., 26th Symp. (Intl.) on Combustion,1996
 #            pp. 1747-1754
 #----------------------------------------------------------------------
 #

data/ptcombust.yaml

@@ -18,7 +18,7 @@ description: |-
   ****                                                                  *
   ***********************************************************************
 
-    Ref:- 1.) Deutschman et al., 26th Symp. (Intl.) on Combustion, 1996
+    Ref:- 1.) Deutschmann et al., 26th Symp. (Intl.) on Combustion, 1996
               pp. 1747-1754
   -----------------------------------------------------------------------
 

doc/sphinx/yaml/reactions.rst

@@ -14,7 +14,7 @@ The fields common to all ``reaction`` entries are:
     must be separated by a space.
 
     Reversible reactions may be written using ``<=>`` or ``=`` to separate
-    reactants and products. Irreversible reacions are written using ``=>``.
+    reactants and products. Irreversible reactions are written using ``=>``.
 
 ``type``
     A string specifying the type of reaction or rate coefficient
@@ -292,7 +292,7 @@ Example::
 ``interface``
 -------------
 
-A reaction occuring on a surface between two bulk phases, or along an edge
+A reaction occurring on a surface between two bulk phases, or along an edge
 at the intersection of two surfaces, as
 `described here <https://cantera.org/science/reactions.html#sec-surface>`__.
 

include/cantera/base/Units.h

@@ -55,7 +55,7 @@ class Units
 
     //! Raise these Units to a power, changing both the conversion factor and
     //! the dimensions of these Units.
-    Units pow(double expoonent) const;
+    Units pow(double exponent) const;
 
     bool operator==(const Units& other) const;
 

include/cantera/equil/MultiPhase.h

@@ -687,7 +687,7 @@ std::ostream& operator<<(std::ostream& s, MultiPhase& x);
  * @param[in] orderVectorElements Order vector for the elements. The element
  *         rows in the formula matrix are rearranged according to this vector.
  * @param[in] orderVectorSpecies Order vector for the species. The species are
- *         rearranged according to this formula. The first nCompoments of this
+ *         rearranged according to this formula. The first nComponents of this
  *         vector contain the calculated species components on exit.
  * @param[in] doFormRxn  If true, the routine calculates the formation
  *         reaction matrix based on the calculated component species. If
@@ -748,7 +748,7 @@ void ElemRearrange(size_t nComponents, const vector_fp& elementAbundances,
                    std::vector<size_t>& orderVectorElements);
 
 //! External int that is used to turn on debug printing for the
-//! BasisOptimze program.
+//! BasisOptimize program.
 /*!
  *   Set this to 1 if you want debug printing from BasisOptimize.
  */

include/cantera/kinetics/Kinetics.h

@@ -680,7 +680,7 @@ class Kinetics
      *              concentrations (no change to legacy behavior). After Cantera 2.6,
      *              results will no longer include third-body concentrations and be
      *              consistent with conventional definitions (see Eq. 9.75 in
-     *              Kee, Coltrin and Glarborg, 'Chemically eacting Flow', Wiley
+     *              Kee, Coltrin and Glarborg, 'Chemically Reacting Flow', Wiley
      *              Interscience, 2003).
      *              For new behavior, set 'Cantera::use_legacy_rate_constants(false)'.
      */
@@ -706,7 +706,7 @@ class Kinetics
      *              concentrations (no change to legacy behavior). After Cantera 2.6,
      *              results will no longer include third-body concentrations and be
      *              consistent with conventional definitions (see Eq. 9.75 in
-     *              Kee, Coltrin and Glarborg, 'Chemically eacting Flow', Wiley
+     *              Kee, Coltrin and Glarborg, 'Chemically Reacting Flow', Wiley
      *              Interscience, 2003).
      *              For new behavior, set 'Cantera::use_legacy_rate_constants(false)'.
      */

include/cantera/numerics/FuncEval.h

@@ -92,7 +92,7 @@ class FuncEval
     // If true, errors are accumulated in m_errors. Otherwise, they are printed
     bool m_suppress_errors;
 
-    //! Errors occuring during function evaluations
+    //! Errors occurring during function evaluations
     std::vector<std::string> m_errors;
 };
 

include/cantera/numerics/ResidJacEval.h

@@ -22,7 +22,7 @@ enum ResidEval_Type_Enum {
     Base_ResidEval = 0,
     //! Base residual calculation for the Jacobian calculation
     JacBase_ResidEval,
-    //! Delta residual calculation for the Jacbobian calculation
+    //! Delta residual calculation for the Jacobian calculation
     JacDelta_ResidEval,
     //! Base residual calculation for the showSolution routine
     /*!
@@ -32,7 +32,7 @@ enum ResidEval_Type_Enum {
     //! Base residual calculation containing any lagged components
     /*!
      * We use this to calculate residuals when doing line searches along
-     * irections determined by Jacobians that are missing contributions from
+     * directions determined by Jacobians that are missing contributions from
      * lagged entries.
      */
     Base_LaggedSolutionComponents

include/cantera/thermo/ThermoPhase.h

@@ -1241,7 +1241,7 @@ class ThermoPhase : public Phase
      * @param element    either "Bilger" to compute the mixture fraction
      *                   in terms of the Bilger mixture fraction, or
      *                   an element name, to compute the mixture fraction
-     *                   bsaed on a single element (default: "Bilger")
+     *                   based on a single element (default: "Bilger")
      * @returns          mixture fraction (kg fuel / kg mixture)
      */
     double mixtureFraction(const double* fuelComp, const double* oxComp,

include/cantera/zeroD/Reactor.h

@@ -154,7 +154,7 @@ class Reactor : public ReactorBase
     //! @returns           True if at least one limit is set, False otherwise
     bool getAdvanceLimits(double* limits);
 
-    //! Set individual step size limit for compoment name *nm*
+    //! Set individual step size limit for component name *nm*
     //! @param nm component name
     //! @param limit value for step size limit
     void setAdvanceLimit(const std::string& nm, const double limit);

include/cantera/zeroD/flowControllers.h

@@ -160,7 +160,7 @@ class Valve : public FlowDevice
         return m_coeff;
     }
 
-    /// Compute the currrent mass flow rate, based on the pressure difference.
+    /// Compute the current mass flow rate, based on the pressure difference.
     virtual void updateMassFlowRate(double time);
 };
 

interfaces/cython/cantera/_cantera.pxd

@@ -932,7 +932,7 @@ cdef extern from "cantera/oneD/Boundary1D.h":
         CxxSurf1D()
 
     cdef cppclass CxxReactingSurf1D "Cantera::ReactingSurf1D":
-        CxxRreactingSurf1D()
+        CxxReactingSurf1D()
         void setKineticsMgr(CxxInterfaceKinetics*) except +translate_exception
         void enableCoverageEquations(cbool) except +translate_exception
         cbool coverageEnabled()

interfaces/cython/cantera/examples/surface_chemistry/catalytic_combustion.py

@@ -7,7 +7,7 @@
 catalytically on the platinum surface. Gas-phase chemistry is included too,
 and has some effect very near the surface.
 
-The catalytic combustion mechanism is from Deutschman et al., 26th
+The catalytic combustion mechanism is from Deutschmann et al., 26th
 Symp. (Intl.) on Combustion,1996 pp. 1747-1754
 
 Requires: cantera >= 2.5.0

interfaces/cython/cantera/examples/thermo/vapordome.py

@@ -13,7 +13,7 @@
 
 w = ct.Water()
 
-# create colums
+# create columns
 columns = ['T', 'P',
            'vf', 'vfg', 'vg',
            'uf', 'ufg', 'ug',

interfaces/cython/cantera/onedim.py

@@ -499,7 +499,7 @@ def write_hdf(self, filename, *args, group=None, species='X', mode='a',
         """
         Write the solution vector to a HDF container file.
 
-        The `write_hdf` method preserves the stucture of a `FlameBase`-derived
+        The `write_hdf` method preserves the structure of a `FlameBase`-derived
         object (such as `FreeFlame`). Each simulation is saved as a *group*,
         whereas individual domains are saved as subgroups. In addition to
         datasets, information on `Sim1D.settings` and `Domain1D.settings` is
@@ -1638,7 +1638,7 @@ def __init__(self, gas, grid=None, width=None):
 
     def set_initial_guess(self, data=None, group=None):
         """
-        Set the initial guess for the solution based on an equiibrium solution.
+        Set the initial guess for the solution based on an equilibrium solution.
         Alternatively, a previously calculated result can be supplied as an
         initial guess via 'data' and 'key' inputs (see
         `FlameBase.set_initial_guess`).

interfaces/cython/cantera/test/test_onedim.py

@@ -554,7 +554,7 @@ def test_save_restore_xml(self):
         u3 = self.sim.velocity
         V3 = self.sim.spread_rate
 
-        # TODO: These tolereances seem too loose, but the tests fail on some
+        # TODO: These tolerances seem too loose, but the tests fail on some
         # systems with tighter tolerances.
         self.assertArrayNear(Y1, Y3, 3e-3)
         self.assertArrayNear(u1, u3, 1e-3)

interfaces/cython/cantera/test/test_reaction.py

@@ -353,7 +353,7 @@ class ReactionTests:
     _equation = None # reaction equation string
     _rate = None # parameters for reaction rate object constructor
     _rate_obj = None # reaction rate object
-    _kwargs = {} # additional parameters required by contructor
+    _kwargs = {} # additional parameters required by constructor
     _index = None # index of reaction in "kineticsfromscratch.yaml"
     _yaml = None # YAML parameterization
     _input = None # input parameters (dict corresponding to YAML)

samples/matlab/catcomb.m

@@ -7,7 +7,7 @@
 % chemistry is included too, and has some effect very near the
 % surface.
 %
-% The catalytic combustion mechanism is from Deutschman et al., 26th
+% The catalytic combustion mechanism is from Deutschmann et al., 26th
 % Symp. (Intl.) on Combustion,1996 pp. 1747-1754
 %
 

samples/matlab/surfreactor.m

@@ -13,7 +13,7 @@
 set(gas,'T',t,'P',oneatm,'X','CH4:0.01, O2:0.21, N2:0.78');
 
 % The surface reaction mechanism describes catalytic combustion of
-% methane on platinum, and is from Deutschman et al., 26th
+% methane on platinum, and is from Deutschmann et al., 26th
 % Symp. (Intl.) on Combustion,1996, pp. 1747-1754
 surf = importInterface('ptcombust.yaml','Pt_surf', gas);
 setTemperature(surf, t);

src/base/application.h

@@ -381,7 +381,7 @@ class Application
      *              concentrations (no change to legacy behavior). After Cantera 2.6,
      *              results will no longer include third-body concentrations and be
      *              consistent with conventional definitions (see Eq. 9.75 in
-     *              Kee, Coltrin and Glarborg, 'Chemically eacting Flow', Wiley
+     *              Kee, Coltrin and Glarborg, 'Chemically Reacting Flow', Wiley
      *              Interscience, 2003).
      */
     void use_legacy_rate_constants(bool legacy=true) {

src/kinetics/BulkKinetics.cpp

@@ -124,7 +124,7 @@ bool BulkKinetics::addReaction(shared_ptr<Reaction> r, bool resize)
 
     if (!(r->usesLegacy())) {
         shared_ptr<ReactionRateBase> rate = r->rate();
-        // If neccessary, add new MultiBulkRate evaluator
+        // If necessary, add new MultiBulkRate evaluator
         if (m_bulk_types.find(rate->type()) == m_bulk_types.end()) {
             m_bulk_types[rate->type()] = m_bulk_rates.size();
             m_bulk_rates.push_back(rate->newMultiRate());

src/numerics/IDA_Solver.cpp

@@ -70,9 +70,9 @@ extern "C" {
      * residual routines:
      *
      * A IDAResFn res should return a value of 0 if successful, a positive value
-     * if a recoverable error occured (e.g. yy has an illegal value), or a
-     * negative value if a nonrecoverable error occured. In the latter case, the
-     * program halts. If a recoverable error occured, the integrator will
+     * if a recoverable error occurred (e.g. yy has an illegal value), or a
+     * negative value if a nonrecoverable error occurred. In the latter case, the
+     * program halts. If a recoverable error occurred, the integrator will
      * attempt to correct and retry.
      */
     static int ida_resid(realtype t, N_Vector y, N_Vector ydot, N_Vector r, void* f_data)

src/oneD/Boundary1D.cpp

@@ -192,7 +192,7 @@ void Inlet1D::eval(size_t jg, double* xg, double* rg,
 
     } else {
         // right inlet
-        // Array elements corresponding to the flast point in the flow domain
+        // Array elements corresponding to the last point in the flow domain
         double* rb = rg + loc() - m_flow->nComponents();
         rb[c_offset_V] -= m_V0;
         if (m_flow->doEnergy(m_flow->nPoints() - 1)) {

src/oneD/StFlow.cpp

@@ -717,7 +717,7 @@ void StFlow::restore(const XML_Node& dom, doublereal* soln, int loglevel)
             debuglog("lambda   ", loglevel >= 2);
             if (x.size() != np) {
                 throw CanteraError("StFlow::restore",
-                                   "lambda arary size error");
+                                   "lambda array size error");
             }
             for (size_t j = 0; j < np; j++) {
                 soln[index(c_offset_L,j)] = x[j];

src/thermo/Phase.cpp

@@ -349,7 +349,7 @@ void Phase::setMoleFractions(const double* const x)
         sum += m_molwts[k] * xk;
     }
 
-    // Set m_ym_ to the normalized mole fractions divided by the normalized mean
+    // Set m_ym to the normalized mole fractions divided by the normalized mean
     // molecular weight:
     //     m_ym_k = X_k / (sum_k X_k M_k)
     const double invSum = 1.0/sum;

test/data/BM-ptcombust-Motz-Wise.yaml

@@ -4,7 +4,7 @@ description: |-
   made by Deutschmann, and it has no physical sense, which should only
   be used for tests.
   See https://www.detchem.com/mechanisms for original model.
-  Ref:- 1.) Deutschman et al., 26th Symp. (Intl.) on Combustion, 1996
+  Ref:- 1.) Deutschmann et al., 26th Symp. (Intl.) on Combustion, 1996
             pp. 1747-1754
   -----------------------------------------------------------------------
 generator: cti2yaml

test/data/BM_test.yaml

@@ -3,7 +3,7 @@ description: |-
   This file is tweaked from the model made by Deutschmann, and it has
   no physical sense, which should only be used for tests.
   See https://www.detchem.com/mechanisms for original model.
-  Ref:- 1.) Deutschman et al., 26th Symp. (Intl.) on Combustion, 1996
+  Ref:- 1.) Deutschmann et al., 26th Symp. (Intl.) on Combustion, 1996
             pp. 1747-1754
   -----------------------------------------------------------------------
 generator: cti2yaml

test/thermo/PengRobinson_Test.cpp

@@ -207,7 +207,7 @@ TEST_F(PengRobinson_Test, getPressure)
     *       b_coeff = 0.077796(RT_crit)/p_crit
     *  The temperature dependent parameter in P-R EoS is calculated as
     *       \alpha = [1 + \kappa(1 - sqrt{T/T_crit}]^2
-    *  kappa is a function calulated based on the accentric factor.
+    *  kappa is a function calculated based on the acentric factor.
     */
 
     double a_coeff = 3.958095109E+5;

test/thermo/cubicSolver_Test.cpp

@@ -26,10 +26,10 @@ class cubicSolver_Test : public testing::Test
 TEST_F(cubicSolver_Test, solve_cubic)
 {
     /* This tests validates the cubic solver by considering CO2 as an example.
-    *  Values of a_coeff, b_coeff and accentric factor are hard-coded.
+    *  Values of a_coeff, b_coeff and acentric factor are hard-coded.
     *  The temperature dependent parameter in P-R EoS is calculated as
     *       \alpha = [1 + \kappa(1 - sqrt{T/T_crit}]^2
-    *  kappa is a function calulated based on the accentric factor.
+    *  kappa is a function calculated based on the acentric factor.
     *
     * Three different states are considered as follows:
     * 1. T = 300 T, P = 1 bar => Vapor (1 real root of the cubic equation)